Ll_transcript_413259

Id TrinityTRINITY_DN45612_c0_g1_i4
Name TranscriptLl_transcript_413259
SequenceCAATTTCATCTTTTATTTCCTATTTGTTTATGTTTTAATTCTTTTATCTTATGCCTACATTGTTCAGCTTTAATTAGTTCGTGGTTAATGTACTTTATTA TTTTAATTGTTTCTTTTTAATAATCATGAACTTCCTCATATGTGTTTTTAAATTAAGCATGACACAACTTATAGCATCCATTTCAAACCGAATGATGTAT AGCAATATTTTAGTAGGAAAAGTTTTGGCATTAAACAGAACCACGTTGTAGGAAACTCTAATATCTTGAAATTCATTAAAGTAGTTGTGATTTTGTTTTG TATAATCGATTATCTAATTAGTTGTTTTAGTTAGTTAAGCTGAGTTCTGTATACAATAATTGATTATCAATAGGGTTAATTGATTATATTGTTAACAATT TTTTCTCTTTTGTATTTTCTTTTCTTTTAGTATAAAAGGTCATTCTTGCACCTCTGTAATCCATTCAATTAATCAATGAGAATAATGAAATACAAAAGAA GAGTTTAGATTCTCTATCTTTTCTTCTTCTTCTTTCTTGAAGCCTCTTTAAGATTTTCTTTCTTTCTTTCTCATTCACTCATTTATCATCTTTCTTGTTT TATCAAGAATATTCATAGATGGCTCTTACCATCTTAACATAAACATTATAACAATATATACTCGTAGATAGTGCATAGCACAGATTCAAATAATTATAGA AATTTGACATGACATTCCCATGAATTGCAATAACTTTTCCACACACATGAAATATTAAGTCACACCAAGGGGTAGGAGGAACCCTTTATCCGACCACATG TTATATCACTTATATGAATAGTTTTCACTCATTTTACTCTTAAACCTCAGGGTCTCATACTTAAACAAATAGATTCTATCCAATTAAAGCCTGAAGTATG TATAATTGAAGCATTCATGATAAGATATTTATATATTTATATTCCTCCTTGTGGTTGAAAGTTGAAACTTGCTTTTTGGTTTTTTCCTTGAGGGTGAGCC GTGGTGCAATGCCGAGGTTGTTGCCTTGTGATCTGGGGTCACGAGTTGCAATCATGGAAATAGTTAGCTTGTGGGATGTGTGATATTGGATGCCAAAGAA GCTGAAGACAAATATATACAATTGGTGCATTCCAAAAGTCATGTAAATCAGATTAAGCACATCAGCACAAAACAATACGATTCTCGAAGGCATAAGATTG CGTTAAAACTGAATTCTATATATTTTAATGAAGGTTCATCAAAAGCTGCTTATCTCGCTGCTGGCTCTGCTATTGAGGTTGTTGAAAAAGTGGCAAGCAG GCAATTGCATTCTGCTGTTGCTATTGTGAGGCCTCCAGGTCATCATGCTGAACATAATGAAGCCATGGGATTCTGTCTATTCAACAATGTTGCAATATCT GCTTCTTATCTCTTAGATGAAAGAGTGAGTAACATTTACATAATAACTACAATCAGTTCTGTATTTTTTGAAAATATTAATCTATAAGTCAGTTGCTGTA TTACAACCTTACTACTATGGTAGTGCCATTTTTGTGACAGCCAGAATTAGGTATCAAGAAAATTTTAATTGTGGATTGGGACGTCCATCATGGAAATGGT ACTCAAAAAACGTTCTGGAATGATTCCCGTGTCTTATTCTTCTCTGTTCACAGGCATGAGTTCGGAACTTTTTATCCATGTGGTGATGATGGCTCTTATA CCATGGTTGGAGAAGGAGCCGGGGCTGGATATAATATAAATGTACCCTGGGAGAATGGGAGATGTGGTGATGCTGATTATTTTGCAGTGTGGGACCACAT TTTGCTCCCGGTTGCCAAAGAATTTAGTCCAGACATAATTATTGTCTCTGCTGGATTTGATGCAGCTGTTGGTGACCCTCTGGGTGGATGTCGTATCACA CCATTTGGTTATTCTGTTCTGTTGGAAAAGTTGATGAATTTCGCTGAAGGTAGGATAGCACTGGTTTTAGAAGGAGGATATAATCTGGACTCCATTGCAA ACTCAATGCATGCTTGTGTTGAAGTTTTGCTTGAAGGCAAACCTGTTACCGAATCTTCAGAGGCTTACCCATTTGAGTCCACATGGCGTGTGATTAAAGC GGTTCGTCAGGAGTTAAGTCCCTTTTGGCCTTGTCTTGCTAGTGAATTACCAAAGGATTTAATTTGTCTAGTTGCACCACCTCCGCATAATCTTATTTCA AGCTCTGACTCTGAGACGGAGGGTGACATGGATCCCCTCAATTCTGATAACCTTGAAGAGCTTCTTCAGGATGTCATAATACCACTATCTAACCTGAAAG TTGATACAGATCAAGAGATTGGTACTTCTAATACTTGGCGATCAGAATTGTCAAATACTTACATATGGTATGCCTCTTATGGATCAAATATGTGGAAATC AAGATTCTTGTGTTATGTAGCAGGTGGACAGGTGGAAGGTATGCAAAAGCA BLAST
Tissuepods
Gene nameLI_gene_140116; 
Additional informationdetails; 

Expression of Ll_transcript_413259

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_413259
BlastpHistone deacetylase 5 from Arabidopsis with 59.44% of identity
BlastxHistone deacetylase 5 from Arabidopsis with 63.16% of identity
EggnogHistone deacetylase(COG0123)
KeggLink to kegg annotations (AT5G61060)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019451711.1)
PfamHistone deacetylase domain (PF00850.18)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;