Ll_transcript_413172

• Id Trinity: TRINITY_DN45627_c0_g2_i1
• Name Transcript: Ll_transcript_413172
• Sequence: CTATTTCCCTCCAAAATGTCGAATCCAAGAATTCCCTTAGTCATTTCATTCGCATGTCACTCTCCAAATTGATCATTTCAGTGTTTTCGGAACTTTTCCT TCTTTTCTTCTCCGTTAGTATTATCTATCAGATTCTGATCACTATCACTGTTAGGGTTTCACTTCAAACAAAATCAGTTAACCTATAAAACGAACTTCAC TTTCATATTCCAATGATTGAAGAAGCATTCTACTCATTTCGTTCTCTCTCTCATTCTCAACCTCCTTCACCACATGGAGGTGGAAATAAAGGTGCAAATG AAGATGAGCAGTTTCAAGAAACCGAGCTTTTCGAGGACACGCTAGTGATTAATAATAGTCCCTTTACTGAAAATCTCAACCTGAACACTGAGCTTGTGGA GGATTCAGACCCTGAAGAGAACATGACAAGTGGTGCAATATGTGAGTATGAACAAGAAGTAGTTCTTGATAGTGAGGATGAAGAAATGGAAAATGGTGAA GTAGTAACTGTTGCCAAAGGATTAATTGAGGATGAAAGTAGTCCAGCATTAAGAAGTCCTTTGATGCGTTTCCAAAAGAGACAGCCGAAGCCATCTCTTG GGAAAGTAGTCTCAAATGACATCACTCCCGAGAAATCTGCTACAGGGGACAAAGAAGTTCTGACTGGTGCTGACAGATTTTATGACAACGATCATCTGTA TCTACCTGCAAGGTTAAATCACATTCACTCATCCAGTCCCGGGGATTCAACCCAAGATGCTCTTGGCTTTGTGGATCGGTACTTATCTTCTAACAGCGTG GATTTATTCCAAGGAGTTCAGCATAGAAAGGGAACTCGAGTTAAATCACCTTATGTCCCAAGTGCAAGAGGATCTCTAAGTTTGGCCAAGAAAATTAAAG TTCGAACTCTAAAAGAGGAAATTGAACCCTACGAATTGGTTGAAAGTGATCAGAATGACAAAGGAGCTGGTATCTTTTATAAAAATATTGAAGCATCTTC AAACTTTAAAAGCTACAGAGAGACATATACGAGAAGACAGAAAAAAGGTGCCCATCTTCAGAATCAAGGGAACTGTAGTATAAGTAATGGATGTGAAGAG AAGTCAGTGCAAGGACCAGGAATGATAACAGAAAATAATAACCCTGTCAAGGAGTTAGATATTCAGTCAAGTGCAACAAGAGAGAATGTTGATGCGTATT CCAGTGTAACAAATACAGAAGACATGCCTGATATTGGTTTAGACACTCAAATAGCCGCCGAAGCTATGGAGGCCTTAGCCTATCTATCCCCTTCTGGTAG TCATTTTAATGATGCCCATCAACCAGCAAATGCACTTGATAGCTCTTTGACTGATTTGACGGAGAATGAATCTCATCTGGGAATTTCTGCAAACAGACAG AAACCTGGTTTACAGTCTATCGCAATAAAATCAAACAAAAGAGATGTCTCTTCCTGTAGCTTTAGTACAGTAACTTCTTCCTCTTGCAAGAACACTGACA ATCAGGATCCAAACCTTGCCTCCGGGAAAATGAAAAGGATAATGGAAAGCAAGTCAAATATTGAGGGACACTTTGACAATAATACCAGTTCTCCAATATC CTGTGAAAATGTCTCATTCGAACAGGGTTGCTCACCAGGAGAGTATAAGAACTTCCAATGTGTTGCCAAGGAACAGAAAAATTGGAATAACGAGAGCAGA TGGACAAGGATCAAAGATCAACCAAGCCATCATACAGGGAGGAACAATACTGTCAAGGAGGAAAACATGATTACACACAAGAGGAAGGAGAATGGTCTGG TCAATGACTCATTGACATTGGATGTTAGGACAAAATATCTGAAATTGCCTTCCAATTCATGTGGGGTGAGTAGAAAGAGCAGGTTGAATGATCAGGTTCA AACTAGTCCACAGCTATCTGCATGTAGCAGTCTTTTAAGGATTGATTCTTGGCTTTACCCAAAAAGACCAAGAGGAAAAAGAAAGCGGGTTAATGTACAT ACCAATCTTGATGCACCTACAATTTTGTGTATTGATGGAAAAGAAAATGTCCTTTCCACTCGCAATCTAGAAGGCCAAGATGATGTCGATGAATCATGCT TACCTCCCAGCCATCCACTTCTCAAAATTTCAAGTATTGCAAATGGCGAATGCTTGTTACAGTGGAGTTCTGTTCAACCAGGTTTACCTGGTGATGCCAT GACATTTCAAAACATGCATGACAAGCATCCCTTATTGCTGGCACATGTTGAAATATCATCGAACAAGAGCATTGCAAAACAGAGTCTGAAAAAAAATCCA GCTCTAGACACTTCAACTGAAGGAGTAAATATGTCAAATGCTAACCAAACATATAACGAGCATAAAAAAAAGCTGTGCAACAAAAACTTGCCAAAGTCAC CCCTTTTCAAGGAGCTTAACAGATTAGGAGTATCTGAGTTCAGACAAGATCTGACATGGAAAGATCTGAGACAGCGAAGAGATATGACATATGTCCGAGT TCTGTTTAGCCAGCATTTGGATGACAGTGTCATCAAGCAGCAGAAAAAGATCTTGGCACGGTTCAACATTTCTATTGCATCTAGCTTAATGGAGGCCACA CATTTCGTAGCAGACAAATTTACTCGTACAAGGAATATGTTGGAAACAATGGCTCTTGGTAAATTTGTGGTGACTCACTTGTGGCTTGAGAGCTGTGGGC AAGCCAACTCCTTTATTGATGAGAAAAATTACATTCTGAGGGATGTACAAAAAGAAAAGGAAATAGGCTTTAGCATGCCCGTTTCTCTCATTCGAGCAAG AGAGAAGCCACTCCTGAAGGGTAAACAAGTCTACATCACGCCACATGTTAAACCTGACAAGGAAGTCCTCACAAGCTTGGTCACAACTGTTCATGGCCAG GTAGTGGATGATAGTCAGATATGTCCAGACAAGAATGATAAGATCTCAGATGATCTATTGATCCTTTCTTGTGAAGACGACTATGCAATTTGCCACCATT TCCTTAATAACGGAACTGCTGTTTACAGTTCAGAGCTTCTTCTGAATGGAATTGTAATCCAGAAGTTGGAACTTGAGAGACATCAACTCTTCATGAATCA TGTTACAAGGAATAAACCAGGTACGTTTAATCGGTTCGGGAAGGTTTACAAAAGGCGTTTGAGACCTGAATCTGGACCGTAGCTGATTTCTGGACAACAC TATTCATTATAATTCAAGGTTGATCTCCAAAAACTAGTGGGTACTCGTCTCAGATGCTGGTGTACTAGCGCAACTCGAGCATTTCTTAAATGTGCTACTT AGTTTTGTTTTTTGTGTGTGAATATTTGCTTGAAGAGAATCAAAGTGATGGCAAAGGATTGCAGTGATAGCTACAGGGTAGGGAATGGTTTTAAATGCAG CTTAAATTGATTAAGATAACTAGTATAAAGATTCTATAAACGTGGTTCATATACACAAAATGTATGTATTTTGTTTTCCTTGCTGAATGTAGAAAAGGAC TACCAGCTACATCATTTTGTACACTGCAAATAGACTAACTGGTGAAGTTCTTTTTCTCACTGAAAATGTATGCTGGAACATGGCTACCCAATTTTCCAGA GCTTTTTGAATTATAT
• Tissue: pods
• Gene name: LI_gene_140145;
• Additional information: details;

Expression of Ll_transcript_413172

FPKM

• PAB: 0
• PNAB: 2
• PS1: 2.1
• PS2: 1.8
• PS3: 2
• PW1: 0.6
• PW2: 0.3
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_413172

• Blastp: PAX-interacting protein 1 from Bos with 32.34% of identity
• Blastx: PAX-interacting protein 1 from Bos with 32.34% of identity
• Eggnog: pax interacting (with transcription-activation domain) protein 1(ENOG410XSGS)
• Kegg: Link to kegg annotations (513213)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418017.1)
• Pfam: Regulator of Ty1 transposition protein 107 BRCT domain (PF16770.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;