Ll_transcript_413173

• Id Trinity: TRINITY_DN45627_c0_g2_i2
• Name Transcript: Ll_transcript_413173
• Sequence: CTATTTCCCTCCAAAATGTCGAATCCAAGAATTCCCTTAGTCATTTCATTCGCATGTCACTCTCCAAATTGATCATTTCAGTGTTTTCGGAACTTTTCCT TCTTTTCTTCTCCGTTAGTATTATCTATCAGATTCTGATCACTATCACTGTTAGGGTTTCACTTCAAACAAAATCAGTTAACCTATAAAACGAACTTCAC TTTCATATTCCAATGATTGAAGAAGCATTCTACTCATTTCGTTCTCTCTCTCATTCTCAACCTCCTTCACCACATGGAGGTGGAAATAAAGGTGCAAATG AAGATGAGCAGTTTCAAGAAACCGAGCTTTTCGAGGACACGCTAGTGATTAATAATAGTCCCTTTACTGAAAATCTCAACCTGAACACTGAGCTTGTGGA GGATTCAGACCCTGAAGAGAACATGACAAGTGGTGCAATATGTGAGTATGAACAAGAAGTAGTTCTTGATAGTGAGGATGAAGAAATGGAAAATGGTGAA GTAGTAACTGTTGCCAAAGGATTAATTGAGGATGAAAGTAGTCCAGCATTAAGAAGTCCTTTGATGCGTTTCCAAAAGAGACAGCCGAAGCCATCTCTTG GGAAAGTAGTCTCAAATGACATCACTCCCGAGAAATCTGCTACAGGGGACAAAGAAGTTCTGACTGGTGCTGACAGATTTTATGACAACGATCATCTGTA TCTACCTGCAAGGTTAAATCACATTCACTCATCCAGTCCCGGGGATTCAACCCAAGATGCTCTTGGCTTTGTGGATCGGTACTTATCTTCTAACAGCGTG GATTTATTCCAAGGAGTTCAGCATAGAAAGGGAACTCGAGTTAAATCACCTTATGTCCCAAGTGCAAGAGGATCTCTAAGTTTGGCCAAGAAAATTAAAG TTCGAACTCTAAAAGAGGAAATTGAACCCTACGAATTGGTTGAAAGTGATCAGAATGACAAAGGAGCTGGTATCTTTTATAAAAATATTGAAGCATCTTC AAACTTTAAAAGCTACAGAGAGACATATACGAGAAGACAGAAAAAAGGTGCCCATCTTCAGAATCAAGGGAACTGTAGTATAAGTAATGGATGTGAAGAG AAGTCAGTGCAAGGACCAGGAATGATAACAGAAAATAATAACCCTGTCAAGGAGTTAGATATTCAGTCAAGTGCAACAAGAGAGAATGTTGATGCGTATT CCAGTGTAACAAATACAGAAGACATGCCTGATATTGGTTTAGACACTCAAATAGCCGCCGAAGCTATGGAGGCCTTAGCCTATCTATCCCCTTCTGGTAG TCATTTTAATGATGCCCATCAACCAGCAAATGCACTTGATAGCTCTTTGACTGATTTGACGGAGAATGAATCTCATCTGGGAATTTCTGCAAACAGACAG AAACCTGGTTTACAGTCTATCGCAATAAAATCAAACAAAAGAGATGTCTCTTCCTGTAGCTTTAGTACAGTAACTTCTTCCTCTTGCAAGAACACTGACA ATCAGGATCCAAACCTTGCCTCCGGGAAAATGAAAAGGATAATGGAAAGCAAGTCAAATATTGAGGGACACTTTGACAATAATACCAGTTCTCCAATATC CTGTGAAAATGTCTCATTCGAACAGGGTTGCTCACCAGGAGAGTATAAGAACTTCCAATGTGTTGCCAAGGAACAGAAAAATTGGAATAACGAGAGCAGA TGGACAAGGATCAAAGATCAACCAAGCCATCATACAGGGAGGAACAATACTGTCAAGGAGGAAAACATGATTACACACAAGAGGAAGGAGAATGGTCTGG TCAATGACTCATTGACATTGGATGTTAGGACAAAATATCTGAAATTGCCTTCCAATTCATGTGGGGTGAGTAGAAAGAGCAGGTTGAATGATCAGGTTCA AACTAGTCCACAGCTATCTGCATGTAGCAGTCTTTTAAGGATTGATTCTTGGCTTTACCCAAAAAGACCAAGAGGAAAAAGAAAGCGGGTTAATGTACAT ACCAATCTTGATGCACCTACAATTTTGTGTATTGATGGAAAAGAAAATGTCCTTTCCACTCGCAATCTAGAAGGCCAAGATGATGTCGATGAATCATGCT TACCTCCCAGCCATCCACTTCTCAAAATTTCAAGTATTGCAAATGGCGAATGCTTGTTACAGTGGAGTTCTGTTCAACCAGGTTTACCTGGTGATGCCAT GACATTTCAAAACATGCATGACAAGCATCCCTTATTGCTGGCACATGTTGAAATATCATCGAACAAGAGCATTGCAAAACAGAGTCTGAAAAAAAATCCA GCTCTAGACACTTCAACTGAAGGAGTAAATATGTCAAATGCTAACCAAACATATAACGAGCATAAAAAAAAGCTGTGCAACAAAAACTTGCCAAAGTCAC CCCTTTTCAAGGAGCTTAACAGATTAGGAGTATCTGAGTTCAGACAAGATCTGACATGGAAAGATCTGAGACAGCGAAGAGATATGACATATGTCCGAGT TCTGTTTAGCCAGCATTTGGATGACAGTGTCATCAAGCAGCAGAAAAAGATCTTGGCACGGTTCAACATTTCTATTGCATCTAGCTTAATGGAGGCCACA CATTTCGTAGCAGACAAATTTACTCGTACAAGGAATATGTTGGAAACAATGGCTCTTGGTAAATTTGTGGTGACTCACTTGTGGCTTGAGAGCTGTGGGC AAGCCAACTCCTTTATTGATGAGAAAAATTACATTCTGAGGGATGTACAAAAAGAAAAGGAAATAGGCTTTAGCATGCCCGTTTCTCTCATTCGAGCAAG AGAGAAGCCACTCCTGAAGGGTAAACAAGTCTACATCACGCCACATGTTAAACCTGACAAGGAAGTCCTCACAAGCTTGGTCACAACTGTTCATGGCCAG GTTGTGTATTCACCTGTATATAACACTCCGCAACTGCAGCTGACCTTTAGTTGCAGTGCTGGATGTTTTTGGAGTATTTAATATGTTTTGTTCCCAGCCT TTTGTGTTGATAAATTAGTTCGTTTATAAATTATCTTCGCTTTTCAGGTAGTGGATGATAGTCAGATATGTCCAGACAAGAATGATAAGATCTCAGATGA TCTATTGATCCTTTCTTGTGAAGACGACTATGCAATTTGCCACCATTTCCTTAATAACGGAACTGCTGTTTACAGTTCAGAGCTTCTTCTGAATGGAATT GTAATCCAGAAGTTGGAACTTGAGAGACATCAACTCTTCATGAATCATGTTACAAGGAATAAACCAGGTACGTTTAATCGGTTCGGGAAGGTTTACAAAA GGCGTTTGAGACCTGAATCTGGACCGTAGCTGATTTCTGGACAACACTATTCATTATAATTCAAGGTTGATCTCCAAAAACTAGTGGGTACTCGTCTCAG ATGCTGGTGTACTAGCGCAACTCGAGCATTTCTTAAATGTGCTACTTAGTTTTGTTTTTTGTGTGTGAATATTTGCTTGAAGAGAATCAAAGTGATGGCA AAGGATTGCAGTGATAGCTACAGGGTAGGGAATGGTTTTAAATGCAGCTTAAATTGATTAAGATAACTAGTATAAAGATTCTATAAACGTGGTTCATATA CACAAAATGTATGTATTTTGTTTTCCTTGCTGAATGTAGAAAAGGACTACCAGCTACATCATTTTGTACACTGCAAATAGACTAACTGGTGAAGTTCTTT TTCTCACTGAAAATGTATGCTGGAACATGGCTACCCAATTTTCCAGAGCTTTTTGAATTATAT
• Tissue: pods
• Gene name: LI_gene_140145;
• Additional information: details;

Expression of Ll_transcript_413173

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0
• PS2: 0.2
• PS3: 0.7
• PW1: 0
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_413173

• Blastp: PAX-interacting protein 1 from Homo with 38.24% of identity
• Blastx: PAX-interacting protein 1 from Bos with 28.05% of identity
• Eggnog: pax interacting (with transcription-activation domain) protein 1(ENOG410XSGS)
• Kegg: Link to kegg annotations (22976)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418017.1)
• Pfam: Regulator of Ty1 transposition protein 107 BRCT domain (PF16770.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;