Ll_transcript_413662

• Id Trinity: TRINITY_DN45632_c0_g1_i1
• Name Transcript: Ll_transcript_413662
• Sequence: AACACCCCCAAAAAGACGAAAAAACCCTCTTCTTCTCATGAAACTCACGCACAAATCACATATCCAAAACCTCGTCGTTTCAGTGATATGATGAAGCTTT AGCGTGAGAGCAAAGAAATCTCAGAATCGTTTCATTTTCATTTCATTCAATTCTCAATGACTACTCTTTCTTCTTTTCCAAACTCTAATCCCAATCCAAA CCCTAATTTCCACCCTGACCAATCCCAAACCATAGACTTCGATTCCGCCATGCCACCGCAGCCCCAATCCCCGCCGCCACACCCTTCGCCGGAATCTCCA TCTCCGCCGCCGCAGCTACTCCAACTTTCCTTCAACCAAGACCATGCCTGCTTCGCCGCCTCCATGGACAACGGTTTCCGCATCTTCAATTGCGATCCAT TCCGGGAGCTTTTCCGGCGGGAATTCGACGGCGGAGGTATTGGCCACGTGGAGGTGCTATTCCGGTGCAATATACTCGCCCTCGTCGGCGGTGGTTCTCA CCCTCAGTACCCTCAAACCAAGGTCATGATCTGGGACGACCACCAGGGAAGGTGCATCGGCGAACTCTCGTTCCGCACGGTGGTTCACGGCGTTCGGCTT CGTCGGGACCGGATAATTGTGATCGTGGAACAGAAGATATTCGTGTACAATTTCGCTGACCTCAAATTGTTGCAGCAGATTGAAACCGTTGCAAACCCTA AGGGGCTTTGCGAGGTTTCGCAGGGTTCGGATTCACTCATTGTCGCGTGCCCCGGGTTGCATAAGGGGCAGATTAGGGTTGAGCATTACGCGGCGAAGAA GACTAGGTTCATTTCGGCGCATGATTCAAGAATTGCTTGCTTTGCTCTCACGCTTGATGGGCAGTTAATTGCTACTGCCAGCACCAAGGGTACATTGGTT CGGATATTCAATACGGATACTGGGACACTACTTCAGGAAGTAAGAAGGGGTGCAAATGTAGCAGAGATCTTTAGTTTGGCATTCTCTGCTACTGCTCAGT GGTTAGCAGTCTCAAGTGACAAGGGCACTGTTCATGTTTTCGGCCTCAAGGTTAATTCCAGTGTTCCTGAGCATGAAAAGCCACAAAGTTCATCCAATTC GGATGCTGCCATTAACCCATCTAACTCACCTCTCTCGTTCATTAAATTCAAAGGAGTGTTGCCCAAGTATTTCAATTCAGAGTGGTCAGTTGCTCAGTTT CACTTACAAGAGGGTTCTCATTACACAGTTGCATTTGGTCTCCAAAAGAACACAGTCATAATCCTTGGCATGGATGGAAGCTTTTATCTATGTCAATTCG ATCCAGAGCATGGTGGGGAGATGACTCAGCTGGAACATCACAACTTTTTAAAGTCACAAACAGCCATATCAGAGGACCAGAGATGAAAAATCCTGTTAAG GGTTGACACACATTTCGGATTCCAGTTAGGATTATACAGTAATATGCACTGTAATATAGTAATAGATGGTGACTGAAGTAACACTTACCCAATTACTAGT TACCCAGGGTCGACCTTTTTGCTTCCCTTGTAATATTGTAATTGCAGTTAGATAGTATAGTTTAAAAAAATAAAATAAGAAATATAGAGTGGTTTGATAA AACTGTCATCTTGTATCAGTTTGTATTAGTATCCTATGAGCATGTCGCAATTTGTCTTCTTGGAAATATCTTCTACCACACGAAAATAAAACATAAAAAG TTGACCCAATATGTGAGAATCTCGTTAAGTGAGGTTTGGAAAGGATAAATGTATATAATATTATTGGCACATAAATTACAATTTATATTGTATTATGAAA ATGTCAAATGAAAATCCAC
• Tissue: pods
• Gene name: LI_gene_140156;
• Additional information: details;

Expression of Ll_transcript_413662

FPKM

• PAB: 17.2
• PNAB: 4
• PS1: 9
• PS2: 5.3
• PS3: 8.3
• PW1: 7.8
• PW2: 8.4
• PW3: 9.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_413662

• Blastp: Autophagy-related protein 18a from Arabidopsis with 65.57% of identity
• Blastx: Autophagy-related protein 18a from Arabidopsis with 72.46% of identity
• Eggnog: WD repeat domain phosphoinositide-interacting protein(ENOG410XQZ6)
• Kegg: Link to kegg annotations (AT3G62770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421581.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;