Id Trinity | TRINITY_DN45632_c0_g1_i12 |
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Name Transcript | Ll_transcript_413682 |
Sequence | AACACCCCCAAAAAGACGAAAAAACCCTCTTCTTCTCATGAAACTCACGCACAAATCACATATCCAAAACCTCGTCGTTTCAGTGATATGATGAAGCTTT AGCGTGAGAGCAAAGAAATCTCAGAATCGTTTCATTTTCATTTCATTCAATTCTCAATGACTACTCTTTCTTCTTTTCCAAACTCTAATCCCAATCCAAA CCCTAATTTCCACCCTGACCAATCCCAAACCATAGACTTCGATTCCGCCATGCCACCGCAGCCCCAATCCCCGCCGCCACACCCTTCGCCGGAATCTCCA TCTCCGCCGCCGCAGCTACTCCAACTTTCCTTCAACCAAGACCATGCCTGCTTCGCCGCCTCCATGGACAACGGTTTCCGCATCTTCAATTGCGATCCAT TCCGGGAGCTTTTCCGGCGGGAATTCGACGGCGGAGGTATTGGCCACGTGGAGGTGCTATTCCGGTGCAATATACTCGCCCTCGTCGGCGGTGGTTCTCA CCCTCAGTACCCTCAAACCAAGGTCATGATCTGGGACGACCACCAGGGAAGGTGCATCGGCGAACTCTCGTTCCGCACGGTGGTTCACGGCGTTCGGCTT CGTCGGGACCGGATAATTGTGATCGTGGAACAGAAGATATTCGTGTACAATTTCGCTGACCTCAAATTGTTGCAGCAGATTGAAACCGTTGCAAACCCTA AGGGGCTTTGCGAGGTTTCGCAGGGTTCGGATTCACTCATTGTCGCGTGCCCCGGGTTGCATAAGGGGCAGATTAGGGTTGAGCATTACGCGGCGAAGAA GACTAGGTTCATTTCGGCGCATGATTCAAGAATTGCTTGCTTTGCTCTCACGCTTGATGGGCAGTTAATTGCTACTGCCAGCACCAAGGGTACATTGGTT CGGATATTCAATACGGATACTGGGACACTACTTCAGGAAGTATGTGAGTTTGGTGTTTTGTTTACGAGAACAACAACAACCCAGCCTTAATCCTGTTAAG TAGGTTGACTGTTTGGTTTATGAGAAGTGTTGTAAATTTTAGGTTGAGTAAAACATCAATGTAGTCTCAGAGGTTGAGATCTATCGATTTGGTCATCGAG ATTAAAAAAACATCAATTTGGTCCTCAACTTTGACGACTGTTTGCTAAGTGAAGGAACAAAATGATGTTTTTTGTAATCCCAGAGATATCTCAAGGACCA AATTGACACATTAACCTTTTTAGGCTTTAGCATGAATTGTAATTTGCCGTGGTTCAATACTTAGGACTTGAAAGCTTTAAAATTGAAGCTGAAAACTGGG TTAGGTTGAACATGTAGCATGTCGATATTAGGAATTTAGGATAGTGAAGATATCAAGCTAATTGAAAAGTAGAGTTATCAATTAGGTCATTAGGTGAGTT CCTGATGTTGACCAGTCTGACGTTTTATGGTGCAGATTTGAACTGGTACAGATTCATTGCTTTCAATTTAATGGTTTCCCATAGCTTATAGCTGTTAAGA GTCCCGAGTCAGTTGAGAATGAGAATAAAGAACCCTTCACAATAACTTGGGTTGGTCCTCATGTATAAATTGTTTTGATTTAAATTTAGGTAAGAAGGGG TGCAAATGTAGCAGAGATCTTTAGTTTGGCATTCTCTGCTACTGCTCAGTGGTTAGCAGTCTCAAGTGACAAGGGCACTGTTCATGTTTTCGGCCTCAAG GTTAATTCCAGTGTTCCTGAGCATGAAAAGCCACAAAGTTCATCCAATTCGGATGCTGCCATTAACCCATCTAACTCACCTCTCTCGTTCATTAAATTCA AAGGTTAAATTTCCAACTTTGTTCTAAAAATATTTCTTTCTATTTTGCTAACTAAGATGTTGTGTTAGAATTGTTAATTTTTGTCTAAGATCTTCTCTAT CATTATGCGACTATTCTATTTGTTGTGACTCATGTGTGCAATGAATGCTTAGATACGAATGCATCATCCTAAGACATCATAATGCTTAGATACGAATGCA TCATCCTAAGACATCATAATGCTTAAATACTTAAATTATTGGCACTGAGCTCTGTTTTTAGGACCGGTGTATCGTTTTAGATTTTCGAGATAATTGTTTT TATGTTTGCTTGTTCTATGTACAACATGACTCTGAGTGAGATTGATCACATTTAGGTATTGTTTGGTAATGTCACATTTTATAGTCAATTTTCCGCAAGG CTAATAGAAATTTGTAATTCAAATGGGTACTGCACGACTATTAGAAATTTATAAATGGTAATAGGGCAATTATGATATCCACAAGAAAATATAATGATCT GAATTTCATTTAATGATCAAAATCAGATTTTACAAAGCAGAAGCACTTTGTTGGTGCTCCCCCCTTTTTGAAGCAGAAGTATAGTCTTGAATTTTTGGGA CTCTGCAAAAGCAGTTTCTAAAAGCCCAGTCAAAGTCTCAAACCAAAATTGACTCTTATCCTTCCAAAGTGGATTTTGTATTCAAGAGTAGCTTCCCTCC CATAGGAAGCTGAACTTGCTGGGCTTTAGTCAGTAATGTAGGTTGATTGCATGAAGGGGTGGGGGAGTTCATTATATCCGTTGTCAATGGTAGATTTTAT ATGTTATGCAATCAATGTTATATCACACATGAAGCTTCTCAGGATCTGAAGTTATGATTTGTTTTTGGTT BLAST |
Tissue | pods |
Gene name | LI_gene_140156; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_413682
Blastp | Autophagy-related protein 18a from Arabidopsis with 63.76% of identity |
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Blastx | Autophagy-related protein 18a from Arabidopsis with 76.59% of identity |
Eggnog | WD repeat domain phosphoinositide-interacting protein(ENOG410XQZ6) |
Kegg | Link to kegg annotations (AT3G62770) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421581.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |