| Id Trinity | TRINITY_DN45632_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_413674 |
| Sequence | AACACCCCCAAAAAGACGAAAAAACCCTCTTCTTCTCATGAAACTCACGCACAAATCACATATCCAAAACCTCGTCGTTTCAGTGATATGATGAAGCTTT AGCGTGAGAGCAAAGAAATCTCAGAATCGTTTCATTTTCATTTCATTCAATTCTCAATGACTACTCTTTCTTCTTTTCCAAACTCTAATCCCAATCCAAA CCCTAATTTCCACCCTGACCAATCCCAAACCATAGACTTCGATTCCGCCATGCCACCGCAGCCCCAATCCCCGCCGCCACACCCTTCGCCGGAATCTCCA TCTCCGCCGCCGCAGCTACTCCAACTTTCCTTCAACCAAGACCATGCCTGCTTCGCCGCCTCCATGGACAACGGTTTCCGCATCTTCAATTGCGATCCAT TCCGGGAGCTTTTCCGGCGGGAATTCGACGGCGGAGGTATTGGCCACGTGGAGGTGCTATTCCGGTGCAATATACTCGCCCTCGTCGGCGGTGGTTCTCA CCCTCAGTACCCTCAAACCAAGGTCATGATCTGGGACGACCACCAGGGAAGGTGCATCGGCGAACTCTCGTTCCGCACGGTGGTTCACGGCGTTCGGCTT CGTCGGGACCGGATAATTGTGATCGTGGAACAGAAGATATTCGTGTACAATTTCGCTGACCTCAAATTGTTGCAGCAGATTGAAACCGTTGCAAACCCTA AGGGGCTTTGCGAGGTTTCGCAGGGTTCGGATTCACTCATTGTCGCGTGCCCCGGGTTGCATAAGGGGCAGATTAGGGTTGAGCATTACGCGGCGAAGAA GACTAGGTTCATTTCGGCGCATGATTCAAGAATTGCTTGCTTTGCTCTCACGCTTGATGGGCAGTTAATTGCTACTGCCAGCACCAAGGGTACATTGGTT CGGATATTCAATACGGATACTGGGACACTACTTCAGGAAGTATGTGAGTTTGGTGTTTTGTTTACGAGAACAACAACAACCCAGCCTTAATCCTGTTAAG TAGGTTGACTGTTTGGTTTATGAGAAGTGTTGTAAATTTTAGGTTGAGTAAAACATCAATGTAGTCTCAGAGGTTGAGATCTATCGATTTGGTCATCGAG ATTAAAAAAACATCAATTTGGTCCTCAACTTTGACGACTGTTTGCTAAGTGAAGGAACAAAATGATGTTTTTTGTAATCCCAGAGATATCTCAAGGACCA AATTGACACATTAACCTTTTTAGGCTTTAGCATGAATTGTAATTTGCCGTGGTTCAATACTTAGGACTTGAAAGCTTTAAAATTGAAGCTGAAAACTGGG TTAGGTTGAACATGTAGCATGTCGATATTAGGAATTTAGGATAGTGAAGATATCAAGCTAATTGAAAAGTAGAGTTATCAATTAGGTCATTAGGTGAGTT CCTGATGTTGACCAGTCTGACGTTTTATGGTGCAGATTTGAACTGGTACAGATTCATTGCTTTCAATTTAATGGTTTCCCATAGCTTATAGCTGTTAAGA GTCCCGAGTCAGTTGAGAATGAGAATAAAGAACCCTTCACAATAACTTGGGTTGGTCCTCATGTATAAATTGTTTTGATTTAAATTTAGGTAAGAAGGGG TGCAAATGTAGCAGAGATCTTTAGTTTGGCATTCTCTGCTACTGCTCAGTGGTTAGCAGTCTCAAGTGACAAGGGCACTGTTCATGTTTTCGGCCTCAAG GTTAATTCCAGTGTTCCTGAGCATGAAAAGCCACAAAGTTCATCCAATTCGGATGCTGCCATTAACCCATCTAACTCACCTCTCTCGTTCATTAAATTCA AAGGAGTGTTGCCCAAGTATTTCAATTCAGAGTGGTCAGTTGCTCAGTTTCACTTACAAGAGGGTTCTCATTACACAGTTGCATTTGGTCTCCAAAAGAA CACAGTCATAATCCTTGGCATGGATGGAAGGTATGATTTGAGAAAAAAAACAAAATTGCAATTTTCTCTTAAGATGCTCATTATTGTTTGTCGCTGGTTG CTATTCTGTCTATGTAAGATGCTGTCAGTTCTATCGTCATATGTAAAAGTGGTTATAATAATGCTGTCAGTTCTGTCACTCAGAAGTATTTGAGTTAACC TATAGAAAAAAGTATGTCCCATACTTTATATGAAAGTAAATACTGTCTCAAAGTTAACTTTCACATATATTTTTGTTCATATGCATTGCATTCAGTCTCA GTACCTCTTCTAACAAACCCCTCCCGTTTCCCCCCATGCACTTGTATTTTTTATGCTTTATATCTGAAACGGTAAGGTTGCTTACCTTGTGATCCGAAGG TCTTGAGTTCAAATCCCAGAAACACTCTATTTGCTTGCGAGGGTAAAACTGTATACATCTACTCTCCTCATACTCCATTAGATAGGAGCCGAGTGCACTA GGCCATTATTTGTATCTGAAACACTTGCTTTTTGATGCTTTTCTGCCCATAACATTATAGATGTTTATGCTATATTATTGTTAATGATTCACAATTGATT GACCCATGCAGCTTTTATCTATGTCAATTCGATCCAGAGCATGGTGGGGAGATGACTCAGCTGGAACATCACAACTTTTTAAAGTCACAAACAGCCATAT CAGAGGACCAGAGATGAAAAATCCTGTTAAGGGTTGACACACATTTCGGATTCCAGTTAGGATTATACAGTAATATGCACTGTAATATAGTAATAGATGG TGACTGAAGTAACACTTACCCAATTACTAGTTACCCAGGGTCGACCTTTTTGCTTCCCTTGTAATATTGTAATTGCAGTTAGATAGTATAGTTTAAAAAA ATAAAATAAGAAATATAGAGTGGTTTGATAAAACTGTCATCTTGTATCAGTTTGTATTAGTATCCTATGAGCATGTCGCAATTTGTCTTCTTGGAAATAT CTTCTACCACACGAAAATAAAACATAAAAAGTTGACCCAATATGTGAGAATCTCGTTAAGTGAGGTTTGGAAAGGATAAATGTATATAATATTATTGGCA CATAAATTACAATTTATATTGTATTATGAAAATGTCAAATGAAAATCCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_140156; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_413674
| Blastp | Autophagy-related protein 18a from Arabidopsis with 63.76% of identity |
|---|---|
| Blastx | Autophagy-related protein 18a from Arabidopsis with 76.59% of identity |
| Eggnog | WD repeat domain phosphoinositide-interacting protein(ENOG410XQZ6) |
| Kegg | Link to kegg annotations (AT3G62770) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421581.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |