| Id Trinity | TRINITY_DN45635_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_413760 |
| Sequence | TGGCCTTCCCTTTAGGGGCATCGATGCCTTTTCTACGAGAAGAGAGAAGAAGCTGCGCTGTCCATTTCGCCTTCATTTAATTTTCTATAATCTCTTCTTC CAACACCGTGTTAGATACGTTTATTTTGATGAGTAGTTTCTTCTGGTAAAGGAGTTATGGCGTCGAAAGGTCCTAGGTATAAGATTGATCATGATACAAA AGCGAAACGGCAAAAGGCCCTTGAAGCTCCAAGGGAGCCTAAGCGACCCAAAACTCATTGGGACCATGTCTTAGAAGAGATGGCGTGGTTATCAAAGGAC TTTGAGTCAGAGAGGAAATGGAAATTAGCACAGGCGAAGAAAGTTGCTTTAAGAGCTAGCAAAGGCATGTTAGATCAGGCTACAAGAGGTGAAAAGAAGA TGAAGGAAGAAGAGCAGCGGGTAAGAAAAGTCGCACTGAGTATATCCAAAGATGTTAAGAAATTTTGGACGAAAATCGAAAAGCTGGTTCTTTACAAGCA CCAAATGGAGCTTGATGAGAAGAAGAAAAAAGCACTTGACAAACAGCTTGAGTTTCTCTTGGGGCAAACTGAGAGGTACTCCACAATGTTGGCCGAAAAT CTTGTGGATGCTTATAAACCACAAAAGCAGAATTCTCCGGAGCTTCAAATGCGTACAGAATACAAGCATGTAGACGGAGACATTACTAATGAAGCTAAGG AAGTTAATGTTGGTGGGTAGAGAGACGTATCTTCAAAGTTTTGAGTGTTTATCACTTCTTACTAACTGTACTCAACCCCTTGTAGAAGAGTATCCATCAG ATGCACCTGACAATGATGAAGAATATGATGTACAATCTGATGATGAATCGGTGGATGATGAGCAAACCCTTGAGGAAGATGAGGCTCTTATAACTGAAGA AGAAAGGAAAGAGGAATTGGCAGCTTTGCGTGATGAAATTGATCTTCCAATTGAGGAGTTACTAAAACGTTATGCTGGAGAGAAAGGTGAGATTTTTCTC TCTGAGGGAGTGAATGGAGAGAAAGGAGAACCAGAAAGGCAAGAAAGTAGTCCAGAGCATAGTAAAGATGCTGTGCAAATAATTAGAGCTGATGATGGTG ATGAAAATGATGATATTTTATCTGTCAGCAAAGTTGTCTCTAGCAACTCCAGCATGTCCCCTGGTCGACGTTGTGACGAAAGTAATGGTGATAAAGCTAC ACAAGCAAGCAATCTATCTCAATATGAGGACCATCCACCTGAAAATCCTAGTGAGGTTCCCAGTGAGATGGCCAATGAAAGTATTGCATATGACTTTAAT GATGAAGAGGAAGATGCTGACTTCTTGCTTGGAACAGAAGATAAGGATGACGAAACAACCTTATCCGAGGAGGAGAAACTGGAAAGGGTTGACGCAATTG ATCCAAGGGATGAGATTGCATTATTGCACAAGGAGAGTGACATGTCTGTTGAGGAACTCCTTGCAAGGTATAAAAAGGATCTGGGTGATAATGAAAAATG GGAAGATGATTCTGATGCTTCTTCTTTATCAGAGGATCATCGGGATCCTCCAGTTCATGAGGAAGCTGGAGCTGCTGTTTCTGTGAATGAAAATATCAAG TCTGGTGAGCACCTGGCTATTGTACAGTCCCAGGCAGAAGAACCTTGGGAAGCGCCTCCCGAGAATTCAGAAAAAACAGAAAGTGAGTATATCATTGCTG ACGCAGCTGCTGCTGCAAGATCAGCACAGCCAACGGGAAACACCTTCTCCACAACTAAAGTACGTACGAAGTTCCCATTTCTACTCAAGTACTCTCTTCG TGAGTATCAACACATTGGATTGGATTGGCTTGTCACAATGTATGAAAAAAGATTGAATGGAATTTTAGCAGATGAAATGGGGCTTGGAAAAACAATCATG ACTATAGCTTTGCTTGCACATCTGGCTTGTGAAAAGGGGATTTGGGGCCCACATCTAATTGTGGTACCAACAAGTGTAATGCTTAACTGGGAGACTGAGT TTTTGAAATGGTGTCCTGCTTTTAAAATTCTGACTTATTTTGGAAGCGCAAAGGAGAGAAAACATAAAAGACAAGGATGGCTGAAACAAAACTCATTTCA TGTATGCATAACAACTTATAGACTAGTTATTCAAGATTCAAAAGTTTTTAAGCGCAAAAAGTGGAAATACTTGATCTTAGATGAAGCTCATCTCATTAAA AACTGGAAGTCACAGAGGTGGCAGACGCTCCTGAATTTTAATTCAAAACGACGTATTCTCTTGACTGGTACACCACTGCAGAATGATCTCATGGAACTGT GGTCTCTCATGCATTTCTTGATGCCTCATGTTTTCCAGTCTCATCAAGAGTTTAAGGATTGGTTTTGTAATCCTATATCAGGGATGGTAGAGGGAGAGGA AAAGGTTAATAAGGAGGTTGTTGATCGCCTGCATAATGTCCTTCGTCCATTCTTGCTCCGTCGATTAAAGCGAGATGTGGAGAAGCAACTTCCAATGAAA CATGAGCATGTCATAAACTGTAGATTGTCAAAGAGGCAGCGGAATTTGTATGAAGACTTCATTGCTAGTTCAGAGACCCAAGCCACTCTTGCAAGTGCCA ATTTTTTTGGGATGATTAGTATTATCATGCAACTTCGTAAGGTTTGCAATCATCCTGACTTATTTGAGGGTCGTCCTATTGTCAGCTCTTTTGATATGTT GGGTATTGATATTCAGTTAAGCTCTTCTGTTTGCTCCATCCTTTTGCCCAGTACCTTTTCTACAGTAGACCTAAGAGGTTTAGGTCTTTTATTTACTCAT CTTGACTATAACATGACTTCTTGGGAAAGTGATGAAATCCAAGCTATTGAGACCCCTACAAGTTTAATCATGGAACGTACTAATGTGGGTGACCTGGAAG TTATTAAGCCTGGACTGAAATCTCAAAAAAAGCTGCAAGGAACAAACATTTTTGAAGAGATCCAAAGGGCAATTTGGGAAGAAAGGTTAAGACAGGCGAA GGAACGTGCAGCAGCTATTGCGTGGTGGAACTCCTTGAGATGTAAAAAAAGACCCATCTACTCAACCTCCCTAAGGGATCTTGTTAGCATAAAACATCCT GTATATGATATTCATCAGGTGAAGGCAAACCCTGTTTCATACTTGTACTCAACAAAGCTGGCTGACATTGTCCTATCCCCAGTTGAACGATTTCAAAAGA TGACTGACGTAGTTGAAAGTTTCATGTTTTCAATCCCAGCTGCACGAGTGCCTTCCCCTGTGTGCTGGTGTAGTAGAATTGAGACACCTGTGTTTCTGGA TTCATCTTACAAGCAAAAATGTTCTGAAGTTCTGTCACCATTACTGTCACCTATCAGGCCAGCAATTGTTCGCCGGCAAGTGTATTTCCCAGACAGGCGT CTAATACAATTTGACTGTGGGAAACTGCAGGAATTAGCAATTTTGTTAAGGAAATTAAAATCAGAAGGTCATCGAGCTCTGATATTTACCCAGATGACAA AGATGCTTGATATATTAGAGGCATTCATTAATTTGTATGGTTACACTTACATGCGATTAGATGGATCAACTCAACCAGAGGAAAGGCAGACCTTAATGCA GCGTTTTAACACAAATCCCAAATATTTTCTTTTCATATTGTCTACCCGTAGTGGGGGTGTTGGTATCAACCTAGTTGGAGCTGACACAGTGATATTTTAT GATAGCGACTGGAATCCTGCTATGGATCAACAGGCTCAAGATCGGTGCCACAGAATTGGTCAGACACGTGAAGTTCATATCTATAGATTGATTAGTGAAA GCACCATTGAGGAGAATATTTTGAAGAAAGCAAATCAGAAGCGTGCACTTGATGATCTTGTTATACAAAGTGGGGGTTATAATACTGAGTTCTTTAAGAA GCTTGACCCTATTGAACTGTTTTCAGGTCATAGAACACTTTCTGTAAAAAATATCCAGAAGGAGAAAAACCAGAACAATGGAGAAGCTTCTGTAACCAAT GCAGAGGTAGAGGCTGCATTAAAAGATGTAGAAGATGAAGCAGATTATATGGCATATAAGAGAGTTGAGCAGGAAGAAGCTGTGGACAACCAGGAGTTTA CAGAAGAAGCCATTGGGAGACTTGAAGATGATGAGTATGTTAATGAGGATGACATGAAGGATGATGAGCCTGTCGAATTCGGTGAATCTGTTCCCAGTTT AAGTAAAGAGAACTTGTCAATGTTAAATGGTAATGATCCTACGGAAGATAGACCACCCTCTGTTCCTAACAAAGAAGACGATGTTGACATGATTGCTGAT GTCAAGCAGATGGCTGCTGCTGCAGCTGCAGCTGGACAAGCAATCACAGTGTTTGAGAGTGAGCTACGTCCTATTGATCGATATGCCATTCGTTTTCTGG AGCTGTGGGATCCAATTATAGATAAAACTACATTGGAATCTGAAGTCAGGATTGAGGACACAGAATGGGAGTTGGATCGCCTTGAAAAGTTTAAGGAGGA GATGGAGGCTGAAATTGATGAAGATGAGGAACCTCTTGTGTATGAAAGTTGGGATGCTGATTTTGCAACTGAGGCATATCGGCAGCAAGTGGAGGCCTTA GCTCAACATCAGTTAATGGAGGAACTCGAATATGAAGCTAAACAGAAAGAGAAAGCTGAGGAAGAAAATTGTGATTCTAAAATGACTCAAACACCAAGTG ATTCAAAGCCCAAATCTAAAAAGAAACCCAAGAAAGCAAAGTTCAAATCTCTGAAGAAAGGATCGTTAACATCTGGCTTGAGATCTGCAAAACAAGAGCC ACAAGCGGATACAATGACTATAGATGATGAGGATGTCAACAGCTTGGCTTTTGGTACTCCAGAGTCAACTTCGCAGAAAAAACGTAAGATATTGAAGCCA ACAACTGATGGTGAAGAAAAAAGACTGAAGAAGTCCAAAAAGATGAAGAGAAAATCTCCTGACATTTGTGCTTCAGATTTAGATTCCAACTCATTAATTG TGCTGGATGAACACACAGAGTCAAAGCTGGGTGAAAGTCTGGTTGATTTTGAACAGAGAATGGCAGGCAGGAGTAAGATGGGAGGAAAAATATCCATTAC TCCAATGCCAGTAAAACGGATATTGGTGATAAAACCGGAAAAACTGAAGAAGGGAAATCTTTGGTCCAAAGATTGTATTCCATCAGCTGATTTTTGGTTG CCTCAGGAAGATGCAATATTATGTGCCATAGTTCATGAATATGGTTCTAACTGGAATTTGGTTAGTGAAACACTTCATGGCATGACTGCAGGGGGGACAT TCAGGGGGAGATATCGCCATCCTGTCCATTGCTGTGAGAGGTTCAGAGAGCTATTCCAAAAATATGTCTTGCACTCGACGGACAATGCAAATCATGAGAA GATCAGCAACACTGGCTCAGGAAAGGCTCTTCTTAAAGTTACAGAGGATAACATTCGGATGTTGTTAGATGTTGCTTCTGAGCAGCCAAACAGAGAGTTA CTACTGCAGAAACATTTTTTTGCATTGCTGTCGTCTATCTGGAAGGTGTCAGCACATGTTGACCGCAGGCAGAATCCATCACCTACTTGTAATGGTCTCT ATTTTGATCAGAGTTTCTTTACTTCCAAATGCCAACAATCACAGAATTCCTTGAAGAAACCCTCTGAAAGGATTATGTTTACTAATTTGGCCCAGAGCAA GAAATTAATAGCTGCTGCTCTGGATGACACAATAAGTAGGTCAGAGAGTGACAAAATCCTCCCAGCTAATCAGGGTAAAGAAATGCCATTGAGTGCAGAT AAGCTGGATATAACATTGGAGTTCCAGAAAGAGGAGAGTGATGTCTTATCTTCATTTCCATCTGTTATAAATTTATCAATTGATGGGATTGGAGCTTCAC CATCTTTAAATAAGCAAACAGGAGAATGTGACCATCTCAGAGGTTGTCTGTCTGCTGCTGAGAATCGTTTCAGGGAGGTATCAAAAACTTGTGAGGAAGA CAGTCCTGGATGGGCTTCATCAGCATTCTCGACAAACGATTCAAGGTCTCAACCTGGATCCAGGATACAATCCTTGGGAAAGCAAAAAACTTCAATCTCT GAAACTTCTAAGCATTCCAAGTCGAAGTCGAAAAGAGTTTCAATGGATCCCAGTGACATGCAACAGGCTGAGCCATCACTCCAGTCAATGCCACCACATA AGGAACTGAAGTTTGATCTTACTACATCCACTATGGATATAGTTGGAATTGATGATATGGATACCAATCCCCCCTTTGGTTTGCATTTGGAAAATTCATT TGAAAGGGAGAGTTCTGAAGCTGTCCCACATGATTATCTAGATGGTTTAATCTTTGGCCTTGATGATTTAATTGAATTCCCTGAATACACTGACATTAGA TAGGGTCCAATGATAGCTTGAAATGCAGTTTTGAACTATTCCTCTTTGCCATTTGAGTACAGTCTTGGCAAGCTTTCTTGTCAATTCATGAACAACCGTT TCTCCTCTTGATCTAAATTTTATTGTTGTTGGTATTTACATTTACATGTTGGTATTTACATTTACATGTTGGTATTTACATTGTTGTTGGTATTAACGTG TTTGTGTCGAGATTGATTTAAATAAAGCAGTGATGGGGAAGGTGTGTTGAAGGCCACTAGCATAAGGTGCATCTGTAAGAGGTGTGGTTGTTATGGTCAT CTAACGTGTAATTTCTCATCCCCAAACCCTATTCACACTCATCGACGAAATGAACCAAACATCCGTTTCTTCTAAGGACTATGCGCAAACATTTATTATG TTGATACCACTCCTTCGTGGTAGAGTAAAAAAAAGAGCTTTTGATCCCATACTCGACAACATTCAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_140163; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_413760
| Blastp | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 from Arabidopsis with 61.8% of identity |
|---|---|
| Blastx | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 from Arabidopsis with 69.52% of identity |
| Eggnog | chromatin modification(ENOG410XP0A) |
| Kegg | Link to kegg annotations (AT3G12810) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414895.1) |
| Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |