Id Trinity | TRINITY_DN45647_c0_g2_i10 |
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Name Transcript | Ll_transcript_413742 |
Sequence | TCTTAAAAATAACTTACAATATTTTAGTATACTTGTTAATTTCCGTTGTGCAAAACTATTATGTATGAGATGGAATGCGGATGCAAAGTCATGGTTAAAC CCACTTAAATCTGAGTGAGACAACATCACTGTACTATTTACATACTTGCTTCCTCTGTCCCCATTCTTTGTTTTTTCTAAACTTCAACGTTCATTCATTA TCTCCTCAACAAACGGAAACTAAGTACACACAGAATAACACAAGTGTTCACTTCACACATGAGAGATTGAGAAAAAAAGTTAGCACCAGCAACAACATTG AACAAACACACCACGAGTTGTAGGTCCCTCTTGATTAAAACCGGGTGCTGTTAGCTCCTATGGCTATAAGACCTTATCATAGCATGAGTAGGTAAAAATA TGAACATTTTTTTCTCATGTGTGGACCTTAGTTTACATAAATTGATACAAATCTAATTGACTTTTACATAAATTGTATAAATCTTTTCCAGTGATATCAT TTGGTACAATTTAGTCACATTTTTAGGTGAGGAAAGAGGCAGTGCCTAGTTAGGGACAATTACTATTATTACTAAGCAGTGGAAGTCACAGTAACTAAAA TCTTCTGCATTTATGGCTTAAGGGGTGTGATGAGAAGAGGTAGCATACAATACAAGTAGTGAGGTCCATACTATTGACACATTTCTCTTAACTTGGATAA AAGGAAGTTAAGCCATGCAGACCCCAAAGACAAGAAGTGGCTCCTCTGCAGTACCGCAGAAGCTTTCTCCCAGCGCCGTTCACCAACTCAGGGCTACGAC TCTAGAGATGGGATCTATTTCTTCTTTAAGTCAAGCTAATAAAATATCAAAGGAAAGAAGCCCCAACGCAGCTGGCCGCAAATCACCTAGAAGCCCAGTT CCTGAGAAGAAGCGCCCAAGCAGAATATCTGAATTGGAATCTCGAATTTCTCAACTTCAAGAGGATTTGAAGAAGGTGAGGGACCAGCTTATTTTATCTG AGACGTGCAAGAAACAAGCTCAGCAAGATGCTGAGGAGTCCAAGGAGCAACTGTTAGCTTTATCTGCAA BLAST |
Tissue | pods |
Gene name | LI_gene_140203; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_413742
Blastp | Interactor of constitutive active ROPs 3 from Arabidopsis with 57.14% of identity |
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Blastx | Interactor of constitutive active ROPs 3 from Arabidopsis with 57.14% of identity |
Eggnog | interactor of constitutive active rops(ENOG410YE21) |
Kegg | Link to kegg annotations (AT5G60210) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413957.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |