Ll_transcript_413374

• Id Trinity: TRINITY_DN45654_c4_g1_i5
• Name Transcript: Ll_transcript_413374
• Sequence: GATTTTCTTAAGATTTATAGTTTGAGGGTTTAATATCAGTCGCAGCAGCACTCTTCTATTTCCTTCAACCATTCATTGAAACAAAAACAGCTTTTGAAGT TGCAGAAGCACTTTTCAAAAACAGCTTAACTGTGCTGCTTCTATTTTGAAAAATGCCTTCAGCAGCGTCTCATGGAAATCACCACCATCCTAGCTCTTCT TCCAAATCCTCCAACGATAACCGCAATCGTCAAAATCAATTCTCGGACCGGAGACACAAGATTTTACAACAGAGGAAGTCTCTTCCCATTGCTTCGGTTG AGAAAAGACTGGTTGATGAGATCCGGAAGAACGATATTTTGATTATTGTTGGTGAAACTGGAAGTGGAAAAACCACACAGATTCCGCAGTTTCTTCTTGG TGCTAAATTTTGCCATGATGGAAAAGTTATTGGGATAACTCAACCCAGACGTGTAGCTGCTGTTACTGTGGCCAAACGGGTTGCTGAGGAATGTGGTGTG GAGTTGGGCCAAGAGGTTGGGTATTCCGTTAGATTTGATGATACTAGTTCCAGCTCCACAAGGATCAAATATATGACAGATGGATTGCTTCTGAGGGAAG CATTGTTGGATCCATATCTTTCCAAGTATTCTGTGATAATTGTTGACGAAGCACATGAGAGAACTGTCCAGACTGATGTCTTGATGGGCTTGCTAAAAAG TGTACAACTTGCTCGGTCAAATTCTGCCAGTCATGGTCAGGGCCTTAATTTTGGAAACAAGAGTGTGAATAGTGTCACGTCATCGGAGAAAGAAAATAGT GGTCAGAGTAATAGTTTCCTTAAAAAGGAGCACCAGTATGCTCCATTGAAGTTAATCATCATGTCTGCAAGTCTTGATGCACGCACTTTCTCTGAGTATT TTTGTGGCGCCAAAGCTGTTCACGTCCAAGGGAGACAGTTTCCCGTGGATATATTTTATACTCGTCATGCAGAGCCAGATTATTTAGATGCTGCCTTGAT AACAATATTCCAGATTCATTTAGAGGAGGGCCCTGGTGATATACTAGTATTTCTGACTGGGCAAGAAGAGATTGAATCTATTGAAAGACTTATTAATGAG CGGCTCACAAAATCACCTCAAGAAAGTCAAAAGCTTCTAGTTGTGCCTATCTTTGCAGCACTTCCATCTGAGCAGCAACTTCGGGTCTTTGCGCCTGCTC CATCTGGTTTTCGCAAGTTGACATGTTTTGTCTAAATGGTGAGACTCAGCGCAACAGAAAGGTTGCTTGCCTTGTGACATGAAGGTCATGTTTTTGAATC CTGGAAACGACATCTTCACTTACGAGGGTAAGACTGTATATATCTACCCTCTCTAGACCCCACTAGGTGGGAGTCTCATGCAGTGGGCTGTCCAATTTAG TTGACATGTTTTGTCTAGTTTTCCATTCATTTTCTTCAAGCTTTCTCTTTTGTCTGACCATGTCTACAATGTGAAGTAAATGACTGGATGTTCACTTGGG CAGATATGACTTGTATAATGGTCATCTTCCGTTTTCTTTCATGATTTGATAACATTGTCTTACCCTTAATCACTATCAGCGACGTAGTCTGACTGTGATA TACCATTTTTCGGTGGCTTTCACGCTTACTGAAATACTTATGCAATTCTGCCAGCATTTCTGCATACCATCCAGTGATCTACCATTACTAAACCGAACTT TATATAGTCTATTGTTAATTTTTCATAAAGGCTCACTGCAACAGCTAACATGTTTGCCATCTCCTATAGTACCTTTAATGTTTTATTTTACCAAACCAAC ACAACTTTTGCTTTAGGAATTATGTCATCTCAACTGGTCATAATTTCCATAAACAGTAAATGGGTATTCAAAATGGTGCATGTCAGTACTGTATATCACC CATTTAATGTCAGCTTAGGGTAATTAAAATAATTTGAGATTTTTATCATATCAGGAATCACTTGTTTTTTAATGTATTCAACCAATTTCTCTGTTCTTTT CTAAGGTGATATTGGCAACTAATATTGCTGAGACATCGGTAACGATTCCTGGAATCAAGTACGTAATAGATCCTGGATTGGTCAAAGCGCGCTCCTATGA CCCTGCCAAGGGCATGGAATCTTTGAATGTAGTACCTACATCCAAGTCTCAGGCTCTGCAAAGAAGTGGGCGTGCAGGGCGTGAAGGACCTGGAAAATGC TTCCGTCTATATCCAGAAAATGAATTTGGTAAACTCGAGGATTCAACCAAGCCAGAGATTAAGCGGTGCAATCTTTCTAATGTCATTTTACAGCTCAAGG CTTTGGGTGTTGATGACATATTAGGGTTTGATTTCATTGAGAAACCTTCAAGGGCAGCTATTATCAAATCATTGGAGCAGCTGTTTTTGTTAGGTGCTCT AACAGATGAGTGTCGGCTATCTGATCCAGTTGGATATCAAATGGCCCGGCTACCCTTGGACCCTGTTTATTCCAAAGCTCTTATTTTAGCTAGTCAATTT AACTGCTTGGAAGAGATGTTGATAACCGTTGCAATGCTGTCTGCGGAGTCCATATTTTATGCTCCCCGTGACAAGTTAGACGAGTCAAGAACTGCAATGA AAAGCTTCTCAAGCCCAGAGGGAGATCATATCACTGTGATTAAAGTGTATCGGGCATATAGTGAATTCTTGGAGAAGAAATCAATTGAAATTGGCAAAGC AAAAAGTGAGAAGGCTTTGAGGAAATGGTGCAAGGAAAATTTTATTAATAGCCGTTCTCTTAGACATGCTTGTGACATTCACAGGCAGATTTTGGGACAT GTTCAACAAATGGGTCTGAGTCTCGCTTCTTGTGGAGATGATATGCTTGAGTACCGCAGATGCCTTGCTGCGTCCTTTTTCCTCAATGCAGCTGTAAAAC AGCCAGAGGGAACATACAGGGCTTTGGCAAGTGGTCAGGTGGTGCAGATACACCCATCTTCTGTATTATTCCGGCAAAAACCAGAGTGTGTGATATTTAA CGAATTGTTACAAACTAATAACAAGTATGTCCGAAATTTAACCAGAATCGACTACCTATGGTTAACTGAGCTGGCTCCTCAATATTATGCCGTGCATAAT TGAAGTATTAATGATGCCACTGAAATGAACAATGCAAGCTTCAGAATATATCTAGCCAGTGGTTTTATGGATGTTGCTTCATGACTTTTAATCATGCCAG ATTTTATAAAGGGCTTATCATTGGTAACCATTTGATGTGTGAGATGTGTAGATACCATCTAATCGTGCAATGGTGAGCCCCTTTTTCTGGGTCGTCATCA CCTTTTTTTTCTCTCATTTGGAAAGTTACGGCTACTAGATTTAGGAATGATTAAGTGGTGGAAGGGTGCACCCTACACGATTACGAACCTCATCCGGGTG GTGGTTCAGCATGAACAATGGAATTATTCACTTCACAAACTATGAAATTGTCTTAAGTTATTAACTTCAATCTCACTTAGGAAAAATATTGTTTGATGAA CAGTCAAATTTTGAGTGCTAATGTATGTCAATAGGTTTAAGAATGAGTTGTATGATTTGTCTAAGTAGTTCATGTATTGAAATATACATCTATAATCTAT TTACTCTGCATAGCAATTTCAGTGGATACTTCCCTCATATAGCAATATCTTCCAAAACATTACAAGTTAATAGCTTTGCTTTGTCAAGTTACCATCCATG AATACTCACTCTGTAGGATAAGGCTATCAATCT
• Tissue: pods
• Gene name: LI_gene_140234;
• Additional information: details;

Expression of Ll_transcript_413374

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.2
• PS2: 0
• PS3: 0
• PW1: 0.2
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_413374

• Blastp: Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 from Arabidopsis with 70.15% of identity
• Blastx: Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 from Arabidopsis with 70.08% of identity
• Eggnog: helicase(COG1643)
• Kegg: Link to kegg annotations (AT1G26370)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434270.1)
• Pfam: AAA domain (PF13401.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;