| Id Trinity | TRINITY_DN45665_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_413499 |
| Sequence | CAATAGCAGTAGTAGTAAATTAGTAACTCAAGAAAAATGGTTTCATCAACAAACCCTACGAAGAACCCTAAAAACGTTTACCACATTGGAGGACTTCAAG TTGAATTTCCCTACAAACCCTACGGTTCTCAATTTGCATTCATGGGAAGGGTTATCTCCACCCTCGATCGTGCTCTCCGGGAAGGTCATTCTCACGCGCT CCTTGAATCCCCAACCGGTACCGGAAAATCGCTTTCACTTTTGTGTTCCTCTTTAGCTTGGCAGCAGAACTATAAATCCAAACATCAACAACATCATAAA CCTGCTCCTGAGGCTGCGATTGATGCTCTTGGTTATGGTGGTGGTTTTGTTCCTCATGACGAGGTTTCTTCTGCATCAGATAATGTTGAGCAGACAGAAC CTGAGGCCAACGACAAAAAGCAGAAGAAAAAGGAAGCACCAACTGTAATATATGCCTCGAGAACACACTCTCAGATTTCTCAAGTGGTTCGTGAATTGCG GAAAACTTCATACAGGGTGCCAATGACTGTATTGGCTTCACGGAAACATTACTGCACCAATAAAAATGTACTCGGCAAAGAGTCAATTGATGAAGAATGT AAACTACTTCTGAAAGACCAAAATGGCGGGTGTCCAGAATTCAAAAATGCACATAAAGTCAAACATCATCCATCACTTCAGAAAGGAGGATGCAATGAGG TATATGACATAGAAGATCTTGTAAAAGTAGGACTAGGGGTGAAAGGCTGCTCTTATTATGCTGCTCGTAATATGGCAGATGATGCACAGTTGATATTTTG TCCATATAGCTACATCATAAATCCAGTCATTCGGGGAGCAATGGATATAGATATTAAAGGAGCCATTGTGATTCTTGATGAAGCTCACAATATAGAAGAC ATTACACGTGATGCTGGCAGTGTGGATATTGAAGATGATGTTTTGGATAAATTACAAATGGAGCTCCAATACCTCTGTTCTGAAAATGTTGCAATTTACC AACCACTGTATGAGATGATACAGGGACTTACTAGTTGGATAGAGAGGAATAAAAATAAACTAGAAAAGCGTGATTTTCAACACTATGTGTCATGTTGGAC AGGTGATAAGGCTTTAAGAGAGCTTGAAGAAGCAAATATTTCAAAACAATGCTTCCCTATCTTGCTAGAATGTGCTACTAAGGCAATCAGAATTGCTACA GATTTGGAGGTGAAAGTACCACATTTAAGTGGCCTGTCAGTTATAACATTGGAAGGTTTATTCTCATCACTAACTTATTTCTTCTCAAGAAATGGTGCCC ACATGTTTGATTACCAGCTTGCTCTGCAGCAATGTGTTAGAAAAGATACCGGAAGAGTTGTTGGAAACTGGATGTACACTTTTAGTTTGTGGTGCTTGAA TCCAGCAGTTGTGTTTAGAGATGTTGCTGATCTTTCTTTATCAGTCATTTTGACTTCTGGGACGCTCTCACCAATGGCTTCCTTTTCTTCTGAGCTTGGA GTTCAGTTTGAAACTAGTCTTGAAGCTCCACATGTCATTGATGTTGACTCACAGGCATGGCCTGCTGTAATCTCAACTGGTCCTGGCAATTATCCTTTGA ATGCAAGTTATAAAACAGCAGATGTATATGCATTCCAGGATGCAGTTGGAAGATCTTTGGAGGAAATATTCAAGATTGTTCCAGGCGGATGTCTTGTATT CTTTCCAAGTTATAAATTGATGGAAAAATTATGTAGGCGTTGGTCTGAAACAGGTCAATGGTCCCGACTTCATGCTGAAAAGTCTGTTTTTGTTGAACCA AGAGGAGGAAACCAAGATGACTTTGAACTTGCATTAAAGGGGTATTATGACTCAATTCATCGTGGCAAACCACCTGCTTCTGGAAGGAAAAGAAGGATCA AGAAAGTTGATATAAGTCACTTCTATGCAGCTGATTCCCAAGAGAATTCTAAGAAAGGAGGAGCTGCTTTACTTGGTGTTTGTCGAGGAAAGGTTTCTGA AGGAATTGATTTCTCTGATGATAATGCCAGAGTAGTTATTATTGTTGGTATTCCATTTCCTAATATAAATGACATTCAGATTGCACTAAAGAAGAAATAT AATGATACATACAAATCATCCAAAAATCTTCTGAGCGGAAGTGAATGGTACTGCCACCAAACATTCCGTGCTTTAAATCAAGCAGCAGGGCGTTGTATAC GGCACAAACTTGATTATGGAGCAATCATCCTATTGGGTAACTCTCCTGATAATTGCACTTCTCATCTTTTGTCTCCTCTTTTTTATTCAGACTTCAGAAA CCGGTTCAGGGAAATCTTTCCTCCCCTCTTTATGTGTGTCTATATATATACTATAAATAATATGTATGTGTATATGTTTATGTTTGTGTACATTGGTGTT TGCAACATAAAGGGCCACATACTCATGTCTAGTTGATATAGCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_140267; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_413499
| Blastp | Fanconi anemia group J protein homolog from Mus with 40.03% of identity |
|---|---|
| Blastx | Fanconi anemia group J protein homolog from Mus with 40.03% of identity |
| Eggnog | helicase(COG1199) |
| Kegg | Link to kegg annotations (237911) |
| CantataDB | Link to cantataDB annotations (CNT0001694) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449510.1) |
| Pfam | DEAD_2 (PF06733.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |