Ll_transcript_413566

• Id Trinity: TRINITY_DN45668_c8_g1_i3
• Name Transcript: Ll_transcript_413566
• Sequence: AGAAGAAATGGAAATGTGATAAATGTTCAAAGAAGTATGCAGTTCAATCAGATTGGAAAGCTCATTCAAAGACATGTGGCACAAGAGAGTACAGATGTGA CTGTGGAACCCTCTTCTCAAGGTAACTAACATTTCTCAACTCATTACAAATGAATGATATATATGTTCAATTCTGAAACCACCATAGTCAGACATCATTC ATTTATGGAGGTAGTAATTTCAATCCGAGGTTGACTCAAATTCACATCAATGTTTTCTTTGGTATTCTAATTCTCTTAATAATAACTATTGTCATCAAAT GCATTTGTTAAACAAATCAACATAAGATGTTGTATAAGAAAAGTATAATTTTTTTCATATGATTATTTTAGCAGAAACATCATTTTTTATGAGAAAAAAA CTATTTTATTACCAAGACACTTGATATATAGTAAAACCCTTATAATAAATTCATATTCTTACTGATCGAGATTTAAATTGAAATTTTATTTCTTTAATAT TTTAGTAATCACAATTTTTTGTTTATAATTTGTATTGTCAGCAATAGTATGATTTCTTTAAATTTCTACAACAATAATCATAGCTAAAATTTAAAATATT GTTACCATCTTCCTTACATTAATTGGAGAAGAAAACAAAAGTTGATTACATTGATACATACATAGCACCTAGCTATATACCATACTCACATGCATATTCT TACTCTGGAAAAGTTTTAATGCACAGCCTGTCCCTAATATGAATTTTTGTCTTTAAGCACTCACAGACACTAAAAATAGATTGATGCATAAAGAGAGAGA AAGAGAGTGAGTATATTCTTGAACTGTTGAGCACTCAAGTGACTTTGTTTGGTTTTGTTGTTTTGTGAGTGTTATGGTCTGTTTTGTTTTATTTTATGAG TTTCAGGAGGGACAGTTTCATAACCCATAGAGCCTTCTGTGATGCATTGGCTGAGGAGAGTGCGAGAGAAGGCATACCCAACCAACACCATTCATCACTT CTTCAACCCTCTCATCACATTAATCTCCAAACACATGATCAAGACAATAATATTCATGCTACTAATAATAATATTTTCCCTTTGAAAAAAGAGCAACAAA GTTTTAGCCTCATAAGTCCACAAATAATGCCCCCATGGCTTGGCCCACAAAGTCACAACAACCCTCTTCATCTCTCTTCCACCTCATCAATCTTTTCCCA TCATCAACAACATCATCATCAAGATCTAAGCAACCTCCATGAAACTCCAAACCCTAACCCTAGTAGTCTTGGATCCACTCATCTTCTTCCAGCTGTGCCT CTTTCTTCCCCAAACATGTCAGCTACAGCTTTGCTTCAGAAAGCAGCTCAAATGGGTGCAACCATGAGCAAGCTTTGTTCCTCACAGTCACAACCCATTA TGAGGCCCCACATGCAGCCTCACGTGTCATCTTCTAGCAATGGCAACAATGACAACATTTCCAACAGTGGTAGTAACAACAACTTTGGTTTGAACTTGTC CTCTCGTGAAGATCACGTGACTACTACCACCACCGCCACTGCCACAGGAGTTTCTCAATCATCTTTTCTTCATCATGTTATGTTTGAAGGAACTTCTTTT GAGGATGCTTTTGGTGGTATACTCAACTCAAACAAAGATGATGCTATGATTCCAAAAACAAACAATGGTGATGATGGAGAAGGAAATGAAGCCATGACAA GAGATTTCTTGAGTCTTAGACCTCTCTCTCATAGTGATTTTCTCACCATTTCTGGCATGGGAGATTGCATGAACTCTTCTACTTCCCATGATCAACAAAA CCAATCCCAAAAACCGTGGCAAGGTTAGCTCTTATATATGTAAGTGGAATTTCTCCCTCATATATATAGATTTTATTTTCCTTTTTAATTTAAGTTTTCC CAAAGGGAAGGACCTTCATAATCCCATTTTCATGCCTTAATGTTCTTAAACTTTAATTTCTATATATTAATGCAATTTCAATTTGTTTATAGATTAATTA AAGGCAGCTTATATTATAACCCTTATCGAAGTTATTATGTCCATCAAAATGGATGTGTAGAAAAAGTAATAATTACATGATGATATTGTTTACTTATCCA TCAAGACAAAATTTTAATTTATTTAACAAGTCACATATTTTCCAAGCTTTTTTCAGACATCCTGTAAAATTATTAGTCACTTTTTACTTTGTAAACAATA ACGAATGGATAATTAAGATATAGATGTAAAAAATGATATGACAAAGCGACACACTGTGAATGTAAACAGTTTTTACATTATTAATTAATTCTCTATCAAT TATCACATTATTAAAAATATCTGATCTTTAAGCACCTTAATAATTACTCATGATTCCTTGAAAGGATAATTTTTATTTATGTGTTTATAATATAACAATA ATATATCTAAATAATAATAAGAATATATTTATGTAGAGCTAATCAATTTCCGCCATTTCTGGAATGGGATGATAATTTTTTTTAATGATTTAATTGTGAT GCATTAATAGTATAAAATATTTTTAAACTATCCATCAATAATAAATTGTCACATACTGAAAATACTAGAGTCTTATAATCATAACCTGAAAATTATTGAT GCCAGACTATTTTTTGGTGAAGAGGGAGGGTGCAGTTTTGTGCAGAGAAAATTTATGCAGATTAGTTGTTACTATTAAACTGAAGTAGTAGTATATTTGT TGAGATGGGC
• Tissue: pods
• Gene name: LI_gene_140290;
• Additional information: details;

Expression of Ll_transcript_413566

FPKM

• PAB: 11.9
• PNAB: 13.8
• PS1: 16.3
• PS2: 11.1
• PS3: 14.9
• PW1: 10.1
• PW2: 16.8
• PW3: 24.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_413566

• Blastp: Protein indeterminate-domain 7 from Arabidopsis with 30.35% of identity
• Blastx: Protein indeterminate-domain 5, chloroplastic from Arabidopsis with 85.29% of identity
• Eggnog: Zinc finger protein(COG5048)
• Kegg: Link to kegg annotations (AT1G55110)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458609.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;