Ll_transcript_413569

• Id Trinity: TRINITY_DN45668_c8_g1_i6
• Name Transcript: Ll_transcript_413569
• Sequence: AGAAGAAATGGAAATGTGATAAATGTTCAAAGAAGTATGCAGTTCAATCAGATTGGAAAGCTCATTCAAAGACATGTGGCACAAGAGAGTACAGATGTGA CTGTGGAACCCTCTTCTCAAGGAGGGACAGTTTCATAACCCACAGAGCCTTTTGTGATGTATTGGCAGAAGAGAGTGCAAGAGGAACCATACCCAATCAC CATTCCTCACTTCTTCAATCCTCTCATCTCCAAATCCATGATCATCAAGATAATAATATCCATGCTATTAATAACATTTTCTCATTGAAAAAAGAGCAAC AAAGTTTCAGTCTCATAAGTCCACAAATAATGCCCCAATGGCTTGGCCCACAAAGTAACAACAACAATAACAACAATAACAACAATAACAACACTCTTGA TCTCTCTTCCACTTCATCAATATTTTCCCATCATCATCATCATCAAGATCTAAGCAACCTTCATGATCAAACTTCAAACCCTAACCCTAGTAGTGTTGGT CCTACTACTCTGGTTCCAGTTGTGCAGCCTGTGATTTCCCCACACATGTCAGCTACAGCATTGCTTCAGAAAGCAGCTCAGATGGGTGCAACCATGACCA AACCATGTTCCTCCCAACCCTTCTTGAGGCCCCACGTGACTTTTTCTACCAATGCCAACAACAACAGTGATAACATTTCAAACAGTGGTGTTTCTCATTC TTCTTTCCTTCATCATGTTATGTTTGAAGGAACTTCTTTTGAGGATGCTTTTGGTGGCATTCTCAACTCAAACAGTGAGAATAATATTATTCAGAAAAGA AAGAATGGTGATGATGATGGTGGGAGAGGAAATGAAGACATGACAAGAGATTTCTTGGGCCTTAAACCTCTCTCTCATAGTGATTTTCTCACCATTGCTA GCATGGGAAACTGCATGAACTCTTCTGATTCCCATGATCAACAAAACCATTCCCAAAATCCGTGGCAAGGTTAGCTCTGATATTTGTAAGTGGATTTTTC TCTTCAAATTATACACATATATATGTATGCATTATTTCCCATCCAAAACTAAGTTTTGTTTATGATATTGTTGAAATTATACACATATATGTGTATGCAT TATTTCCCGGAGTTATAAAGTAGTTTGATGGTTAGAGTAAATGAGGTTGATGTATATCTCACCTACAACAAAATACTAACATACTAACATTTACATTCTA AAAAATTGTCGATAAAAAAAAAAAGACGGGCCTTGTGTTATTGAAGCGAAACCAACTAAAAAACAAAAAGCCCATAAAGGCCTGAATTGTTGAACCCTAG TCTCAGTTTCTGAATAGTTTCATTAACCTAATAAAAAAGTCTCACTGTTTTCGTTTCCTGCTATTGAATTCTTCAATTTCTCATTTTTCTTTCAATCTGC TTTCAAGTGATTCAAATAACCTTATCACTTATCTGCCTCATCAATACCTTTTCATCTTCTTCACTTTATTGTTACCTCTCAAAAACCTCGCTGCATTCAC ATCATTTCTCACTTTTTTGCTTAAAAATTGTTACTTTTACCATTTTTTGGTTCTGTTGCATCGATGTTTTCAATGTCTGGATAACCCTTTTGATTCTTCT GTAAGAGGGTATACTTTGTTATCCACTTAATGAAGTGATTAAACTTGTGAATTTCTTGCAGGCACTGACCTATTTTGATATGAATCAATGACATGAAGCT ATTATCAAACTTCAGATACAACATCTTCAATTATGACTCTTTAACAATATCATCCAACAATTCCTTTGGATTATTCAACCGTTTCATTCAAAGGAGATGG AAAAAACCAACTGTTTCTGCTCAAACCCGTTTGGAGGACAGAGTGAGGGACCCACACCTAGACAACTTCATGGTCCACCTTAACAAACTCAAATGTATCC TCAAAATGCACCACCTTATGTCAAGCCGAAAGCGCGGTTCGTTTGTGTCCTTACAGCTCATGTCTCGATGGAGGAACATTGTTGGACTAAATGTCACCAT GGGGTCCTTTATTTATAGATACCCTCATGTTTTCGATGAATTTGTGCACCCATTTCGGAGGAATTTGTGTTGTAGAGTTACTCGAAAAATGAAGGAATTG GTCATGTTGGAAAAGGTTGCTGTGAAACAGCAGGAGATGGAGGCTGTGAAGAGGTTGAAAAGGTTGTTAATGATGTCTGTGAATGGTACCCTTCATATTC ACGCGTTGAGGTTAATCAGAAGAGAACTCGGCCTTCCCGAGGATTTCAGAGACTCAATTCTTGGCAAGTATAGTGGCGACTTCAAATTGGTTGATTTAGA GATTGTGGCATTAGTTGATAGAGATGATGAATTGGGAAAGGCAGAAGTTGAGAAATGGAGGGAGAAAGAGTATACAGAGAAGTGGCTTAGTGAATTTGAG ACCAAGTTTGCTTTTCCTATCAATTTCCCAACAGGGTTTAAGATTGTGGGAGGCTTTAGGGAGAAGTTGAAGAATTGGCAAAGGCTTCCATATGCAAAAC CGTATGAGAGGAAAGAGGTCATTCGGGTTCGATCGTGTGGTGGGGTTGAGCGCTACGAGAAGAGGGCTGTCGCTGTTCTTCACGAGCTCTTGAGCTTGAC CATAGATAAGATGGTTGAGGTGGATCAACTGGTTCATTTTAGAAAAGACTTGGCTATTGAAGTTAATATGCGCGAATTGCTGCTTCGGCACCCTGGAATA TTTTACATATCTACAAAAGGAAAAACACAGACAGTTTTTCTTAGAGAGGCATATAGCAAAGGGAGATTGATTGATCCTAATCCCATATATATTGCACGTA GGAATATGTTGGAGCTTGTATTATTAGGAAGGAGAAAAACTAAACAATTGTTAGGTTGTGATAATGTTAAGGAAGAGAACAATAGTGTAGTGAATGAAGT AGATGTTGAAGGTAAAAGACAAGGAGATTGGGTGATTCCATTTTTGGAGAGTTCTTAAGAGAATAGATCAACATATTTGAAGAGCTTATATATTCATTTG ATTATTAGCATATCTTTTTCTTTTGCACCTTGTCCTTATATTTTTGAACTTGTCATATTCATATATAAT
• Tissue: pods
• Gene name: LI_gene_140290;
• Additional information: details;

Expression of Ll_transcript_413569

FPKM

• PAB: 1.7
• PNAB: 3.9
• PS1: 3.6
• PS2: 2.6
• PS3: 4.1
• PW1: 3.5
• PW2: 4.1
• PW3: 3.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_413569

• Blastp: Protein indeterminate-domain 11 from Arabidopsis with 37.56% of identity
• Blastx: Protein ROOT PRIMORDIUM DEFECTIVE 1 from Arabidopsis with 40.28% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT3G13810)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444447.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;