Id Trinity | TRINITY_DN45704_c2_g2_i1 |
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Name Transcript | Ll_transcript_276843 |
Sequence | AAAAAAGTTTAATTGGGTTTAGAGGACATTGATGTGTATAACTCTGTCTCACTCTCTTGTACCATCCATTAGCCAGGCCAGTACAGTGTGAGATTACAGC AAAAAATGGAAACCACTTTGGCACATATTAACTAAATGGAAACCACTTTGGCACTTATTAACTAATGAAGAGGAGACTGCTATTGTTCCTGTAATGGCAA TGCAAGTAGCATGCATGTCACTCTGTATCTCTTTCTTCTCTCTTCTCTTTTCTCTCTTGCTCCTTCTTTCACTCTCTCAATTTCTAATATGGCCAATGCC AACAAAAACAACACCAACTTCATCACCATCAACCTTTATCCCACTTCTGCATTCCATAGTGTATACAACTTTTGCTTTTGCTTTTGCTTTTGGTGCCATT TCATTTTTGCAAAAAACCTCCATTTGGGGAAGGAGATTACTCGGTGAAGCAACCTCCTACTTGGGGAAGAAGCTCGCTCGGTTAAGGAAGCAATCCCCTA TAAATGCAGAATGCATTCCTTCACATTACTCACCACTCACACCTCCTCTGCCATGGCTTCTTACTCCCCTGTTTCTGTGTTTCTCTCCTCCTCCTTCTTC TTCTTCTTCTTCTTCTTCACCATCATCACTCCAACTTCTCTTATTCTAAAGAGGTCATTTCCCAACCGGGGAATGAACCTTACCGATATGAGGAAATTAG ACATGGGCAGGCATGAGAGAATGATACAATCCCATGTTCTCAACTTCCCCCTTCATGGAACCTCAAATCTTTTTCGAGCTGGGCTTTACTATACAACTGT GTACTTGGGATCACCTCCGAGGGAATTCCATGTGGATATTGACACTGGTAGCGATGTTCTATGGGTTAATTGTGTACCATGCGATGGTTGTCCTCAAACA AGTGAGCTACCGTTTAAGCCCAATTACTTTGACCCCAGGAGTTCATCGACTTCATCAATTATTTCTTGTTTAGACAAGAAGTGTAGAAGTATTGAACATT CGCGAAAAACAGTTTGTACCATCGACAACAAATGTAGCTTTAAGTTGGATTACGTAGAAGGTAGCATCACATCGGGCTACTTTCTTTCGGATGTAATGCA TGTAGGCACTATTGCAGAGGGATCAGTGGCACCAAATTCTTCTCTGCCATTATTATTTGGTTGTAGCAATCTCCGGAGTGGGAAATTGACATTGCCCATT AGAGCGATTGACGGTATATTTGGGTTTGGGAAAAGCGACATATCTTTCATCTCTCAACTCCACTCAGAAGGAGTAGCTCCAAAAGTGTTCTCCCATTGCC TCAAAGGAGACATTAGCGGCGGGGGCATACTCGTTCTTGGCGAGGCTCTGGATCCAGATATGATCTATAGTCCACTTATTCCAAAACAGCGATTTTACAA TTTAAAGCTGGAGAGCATCACCGTTAATGGACAGATGTTACAGGTTGATCCAGAAGTTTTTAAAACATCAAGTCGAAAAGGTGCCATCGTTGATTCTGGA ACAACTCTGGCATTTTTTAACGAAGGGGTCTACAATCCCCTTGTTGACGCTATTACTCGTACAATACCACCATCAGTAGGTACTACTGATTCGGATGGAT ATCACTGTTACTTGGTAACCAACAGTGAGTTAAGCATCATCAACATCTTTCCTCTAGTAAGTTTGAATTTTGCTAACCAGGCCTCTATGGTTTTAAGACC AGAAGACTACCTTTTACCATTGCCAATGCTTGGTGGAGAAAAGTGGTGTATTGGCTTTCAGAAAGCCCAAGATCAAACAATTCTAGGAGACATTATTTTA AAAGACAAAATTATTGTCTATGATCTTGCTAAGCAAAGAATTGGATGGACTTATCATAACTGTTCATTGCCATTTAACGTCTCTACTCGATCAAGTGGAA AAAGTATAACTGAAAAGGGAGGGACTTTACACTTGACAATGATAGTGGTCTTGGTTTTCTTTATGCACTTGATATAGTTAGTAGGCCATCTAGAGAAAGT GTTTTATTAATCTTGTAATTAAATAATATTATTATTATTAGACTAGTATTTATATTTGTAGGATGTTATAATTTGTATTATGTTGCCTTTTATATGAATA TCAATGAAGAAATGAATAAGTTATTTGATTAGCTTTGTTATTTCTTATTAGAAGTAGTGTTAGAACCCTTGGTGCCATTAATATGAAGATAAGTTCAATC CCTTCCTGTAAGTTTTCCTTTTTAGTTGACATAATTCTCATTTGGTGTCATTTTACATGTTTATTTAGAATGATGCATATTGTAGTCTAAAGCTTCTATT TCATGTAACAAATTACACACCTTACTGAGAAAACATGCCTTTGTTCCTTTATAATTATACATGAAATTTTAACCATCATAATTCTGTGTTGATGCCCAAA TCAGCTATGGCATTTAGTATTGCAGCATCAGTGTCAGGCCAAGGTATTGGATCAAGAGCAGAGAGGTACATGCTGAAGGCACTTGCTGCAAGATACTCTG ATGTTGTTGGTTCGGCACAATTAGAAGATCTAAAAAGTATGAATATGTATGTTTTATTTAAAATTTTATCTGTATAATTAAGGAACATGGGATTGGTGAG AATTTATTATATGAAAATGAGATATGAAATTTGGCAGGTACTTGAGTCAGTTGAGTGGATG BLAST |
Tissue | pods |
Gene name | LI_gene_140407; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_276843
Blastp | Aspartic proteinase-like protein 2 from Arabidopsis with 34.67% of identity |
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Blastx | Aspartic proteinase-like protein 2 from Arabidopsis with 33.96% of identity |
Eggnog | aspartic(ENOG410XNV7) |
Kegg | Link to kegg annotations (AT1G65240) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452714.1) |
Pfam | Xylanase inhibitor N-terminal (PF14543.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |