Id Trinity | TRINITY_DN45717_c3_g1_i3 |
---|---|
Name Transcript | Ll_transcript_277008 |
Sequence | AATTTTGTTACTCTCCCGCTCAACCGAATCTCTCTTACTCTTTTCGTTTTCTCTTCTGCTAAACCCTAAAAATCACATTTTTAACATTAATTTATCAAGA AAATTGAAATTCAAATTCAAAGATTTGTATGTTCCTGATGCCGTTTAAATTTGCATTTTTCTTTTAAGGTTTTGAAGTTATTGTTGAAGCTTCAATCTTT ATTGGAACTTCAACTATATCGCTTCAACTTCCCTTCAAGCTTGAATTTTTAGACCCTCCTTTGCATTTCAGCTCATTAGTCATTCTTCTACCAAACAAAT TTGTTAGCAAAGGAAAAAAGATAAAGGGTTTGCTCAATTATGTTGATTTCGGCTTCAGTGTTTTTTGGAAGTGAACAAAGTTGAAGCACTTGAATAAAGT TTGGAACTTTTTTCTTTTTAGCCTTACCCCTTTTGTTTAATCCAGTGTGCTGTGTTTGACGGTTTTGACACTTTGTTTTAATTCTTGAATGGTCTCAAAC TACTGATTCTTGTTCATAAAGGAGGAACTGGTAATGGAGACATTTACTCTTAATATGGATGGTGGTGAGTGCTATAGTGATAATGGTAATGAAAATGAGA GTTTGGGTGATCATATACTCGAGGAAATGGAATCGATTTGGCTAGATATCGATGAGAGGTTAACCATCATAAGGATGGTGAGTGACTCTGTCATAAAGGG TATGGTTAGTGCTGTTGAGGAACAAGCGGCTGAGAGAATTGCTCGGAAAGAAATCGAGGTTGTCGGGTTGAAGAAAATGCTACATAGTTTCGAAGAGGGT TCAGATATTAAAACATTGGGGTCTTCGGTACCTAATCGTGAACTCCGTGAAGCTGCTACATATCATATTTCAGATGCTGTTTTAGAGAACGGTGGGTTTT TTGGGTCTGATAGCCTACAGGTTGCTGTCACTGAGCAGTTAAAGCAACTGAAGAAAGAGATAAATAAAATAAGAGGGTCTAGTTCTATCAAAGGAATTTG TTCAGGTTCTGATTTGGTGGGTTTAGGTGGCATTCTGCAAGAGAATGTACCGGAAAGATGGATATATGTTGATAAATCTTTCGAAAGTCTAAATGATACC CTAGACGCTTTGTGCAGAAGGGTGGAAGTTATGGATCAGTCATTGAAAGCATCGCTTTGGCGTGAGGAGCTGGAGTTTCGATCAGAAATTGAACGCATGG TGGTTAGCAACTGTATCTGGGGTTTGCAGCAGGAATTTGAAGAGAAACTATGGCAGCTTTATGATTTTGAGAGTAGAAATTGTTTTGACCAACATAAAGA GATATCAAGCTTGCGCCTAGAATTGGATTCAATATTTAAGGCACTCTCTGTTTCTGAAACCGGGCTGCTTATTTCTCATGGATCCCTGGAGAACGGCGAG GAATGGTGTCATAGTAAAAGGCCTGACCATTTCCACTGGAAGCTTCCAACGAGTCTTTCGTTGCCTTTAACTTTGGAGGAAAATGGCAAACAGGAAAACT CAAAGAATAGCAAGCATGAGAATTTGGATCCTTCCTTACTAAAGCACGAGTCTAGAGAAGAATTGATTACCTATTTTAATTCTGAGATAACTAAGATGAG AAGAAACCATGAATGTCAATTGCAAGAGATGACTGAAGAAAATTTCCGCCTTAAGCGGGAAGTATTGAATTTGAAAGAAAGGGGCTCTCCTTTGCTATTA AAGAAGGACAAAGACATTGATTTGTTGAAGAAAAAAATCCCTCATGTCATCTCAAAACTGGACAAAATCCTTGTTGGAAATGAGAAAGTGAATCAGTTCA CTACAAGCATTGAATCTCTTAGTAGTTTAAAGGATAGATTGGATTTCTTACTCTCTGAGAATCATCAACTGAAGGACACCGTAACGGATAAGAAAAAAGA AATTAAGAGTCTTTCTTCTCACCTTTCCGATGTTGTGGAGAAATTATTGCTGCAACAACTGACCGAGAAAAAATTGTTACAGACCATTTGGAAGCTTGAG GGCGATATCGGGGATGTACATACTGAAGTTTCAGTTATTCAAGATGTATATAAATGCCTCTTTGAAGATATTACAAATGAATTCAGATGCATCACCGAAG AATTACATCTGAAGAACAATATAACGGAAGAAATATATAAAACAATTATAAAAGAAACTGCTCACAGCCCTCAAGCTTCTTGGGAGCTGGAAATCGAAGT AGAAGATATGAAGTCATCTATAATGCAATGGCTATTGGATATTAATCAGATTATATTTAAAGAAGCTTTAGTGGATGCAAACAAAGCATTAAAGTCGGAA GGTTCCGAGAAGGAGGAACTGAAACAAAAAATACTTACATTGACATCAATGGTGGAAAAAAGAGATAAACTAGCACAAGAAGCAGCAGATTTGTTGGTAC AAGAGAAGCAAAAGACGGAGCTGGCCTATGAACAAGTTGACAGCTTGCGAACTCAGATACTTCAGCAACAGGGATTCATTACCGAGACCAATAAAGAGTT GGATGCCACTAAGGGCGACCTTGTTGCAGCTTTGAATGAGATTGAACGATACAAGGAGCAAATGCACAAATTGCATCAAAGTCTTGAATGTAGAATGGAT GAGCTTAGAGAAGCTGATGATGAAAGAAAGTTGCTTTCTTCAGTTGCAAAAAAGCAGCAAGATGCATTAACACTGGTTGAGGCAAAAGAAAGGGAGACCA GGAAGCAAATGGAATCAACCATTGATCTCATTCATAAATTGTTGACAATGGTTACTGATTTTGAAGCTAGAGTAAACGGAGATATGTCAAAAAATTGTTT AAGGCTCGAAAACATGAAATCTGAGTTCCGTTACATTAATAACAAAGCCAATATACTTAAAACCACGGGGTTGGTGTACAAGCAAAAGCTAGAAACAAGA TGTTCTGATCTTACAAAGGCTGAAGCAGAGGTTGATCTTTTGGGGGATGAGGTAGATACTCTTCTTAACCTGCTTGAAAAAATCTACATTGCACTTGATC ATTATTCACCCATATTGCAGCATTACCCAGGGGTAAAAATCTTTTCCCCCTTTGTTCATCCTTTTAATGTTTGTACTGGATTGAAGTTTGCATAATGCCA ATAGATGTGATATTCTTGTGAAGAGTCTTATCAAGTCAGCATCACGTAGTGAGAGTAAGGCTTGGTTGTTGTTTTTGTTGTAATGTATATTTATTTTAGT GTTAGGGATGTTGAAAG BLAST |
Tissue | pods |
Gene name | LI_gene_140437; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_277008
Blastp | WPP domain-associated protein from Lycopersicon with 40.89% of identity |
---|---|
Blastx | WPP domain-associated protein from Lycopersicon with 39.67% of identity |
Eggnog | WPP domain-associated(ENOG411240X) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019420011.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |