Ll_transcript_277020

• Id Trinity: TRINITY_DN45717_c3_g1_i7
• Name Transcript: Ll_transcript_277020
• Sequence: AATTTTGTTACTCTCCCGCTCAACCGAATCTCTCTTACTCTTTTCGTTTTCTCTTCTGCTAAACCCTAAAAATCACATTTTTAACATTAATTTATCAAGA AAATTGAAATTCAAATTCAAAGATTTGTATGTTCCTGATGCCGTTTAAATTTGCATTTTTCTTTTAAGGTTTTGAAGTTATTGTTGAAGCTTCAATCTTT ATTGGAACTTCAACTATATCGCTTCAACTTCCCTTCAAGCTTGAATTTTTAGACCCTCCTTTGCATTTCAGCTCATTAGTCATTCTTCTACCAAACAAAT TTGTTAGCAAAGGAAAAAAGATAAAGGGTTTGCTCAATTATGTTGATTTCGGCTTCAGTGTTTTTTGGAAGTGAACAAAGTTGAAGCACTTGAATAAAGT TTGGAACTTTTTTCTTTTTAGCCTTACCCCTTTTGTTTAATCCAGTGTGCTGTGTTTGACGGTTTTGACACTTTGTTTTAATTCTTGAATGGTCTCAAAC TACTGATTCTTGTTCATAAAGGAGGAACTGGTAATGGAGACATTTACTCTTAATATGGATGGTGGTGAGTGCTATAGTGATAATGGTAATGAAAATGAGA GTTTGGGTGATCATATACTCGAGGAAATGGAATCGATTTGGCTAGATATCGATGAGAGGTTAACCATCATAAGGATGGTGAGTGACTCTGTCATAAAGGG TATGGTTAGTGCTGTTGAGGAACAAGCGGCTGAGAGAATTGCTCGGAAAGAAATCGAGGTTGTCGGGTTGAAGAAAATGCTACATAGTTTCGAAGAGGGT TCAGATATTAAAACATTGGGGTCTTCGGTACCTAATCGTGAACTCCGTGAAGCTGCTACATATCATATTTCAGATGCTGTTTTAGAGAACGGTGGGTTTT TTGGGTCTGATAGCCTACAGGTTGCTGTCACTGAGCAGTTAAAGCAACTGAAGAAAGAGATAAATAAAATAAGAGGGTCTAGTTCTATCAAAGGAATTTG TTCAGGTTCTGATTTGGTGGGTTTAGGTGGCATTCTGCAAGAGAATGTACCGGAAAGATGGATATATGTTGATAAATCTTTCGAAAGTCTAAATGATACC CTAGACGCTTTGTGCAGAAGGGTGGAAGTTATGGATCAGTCATTGAAAGCATCGCTTTGGCGTGAGGAGCTGGAGTTTCGATCAGAAATTGAACGCATGG TGGTTAGCAACTGTATCTGGGGTTTGCAGCAGGAATTTGAAGAGAAACTATGGCAGCTTTATGATTTTGAGAGTAGAAATTGTTTTGACCAACATAAAGA GATATCAAGCTTGCGCCTAGAATTGGATTCAATATTTAAGGCACTCTCTGTTTCTGAAACCGGGCTGCTTATTTCTCATGGATCCCTGGAGAACGGCGAG GAATGGTGTCATAGTAAAAGGCCTGACCATTTCCACTGGAAGCTTCCAACGAGTCTTTCGTTGCCTTTAACTTTGGAGGAAAATGGCAAACAGGAAAACT CAAAGAATAGCAAGCATGAGAATTTGGATCCTTCCTTACTAAAGCACGAGTCTAGAGAAGAATTGATTACCTATTTTAATTCTGAGATAACTAAGATGAG AAGAAACCATGAATGTCAATTGCAAGAGATGACTGAAGAAAATTTCCGCCTTAAGCGGGAAGTATTGAATTTGAAAGAAAGGGGCTCTCCTTTGCTATTA AAGAAGGACAAAGACATTGATTTGTTGAAGAAAAAAATCCCTCATGTCATCTCAAAACTGGACAAAATCCTTGTTGGAAATGAGAAAGTGAATCAGTTCA CTACAAGCATTGAATCTCTTAGTAGTTTAAAGGATAGATTGGATTTCTTACTCTCTGAGAATCATCAACTGAAGGACACCGTAACGGATAAGAAAAAAGA AATTAAGAGTCTTTCTTCTCACCTTTCCGATGTTGTGGAGAAATTATTGCTGCAACAACTGACCGAGAAAAAATTGTTACAGACCATTTGGAAGCTTGAG GGCGATATCGGGGATGTACATACTGAAGTTTCAGTTATTCAAGATGTATATAAATGCCTCTTTGAAGATATTACAAATGAATTCAGATGCATCACCGAAG AATTACATCTGAAGAACAATATAACGGAAGAAATATATAAAACAATTATAAAAGAAACTGCTCACAGCCCTCAAGCTTCTTGGGAGCTGGAAATCGAAGT AGAAGATATGAAGTCATCTATAATGCAATGGCTATTGGATATTAATCAGATTATATTTAAAGAAGCTTTAGTGGATGCAAACAAAGCATTAAAGTCGGAA GGTTCCGAGAAGGAGGAACTGAAACAAAAAATACTTACATTGACATCAATGGTGGAAAAAAGAGATAAACTAGCACAAGAAGCAGCAGATTTGTTGGTAC AAGAGAAGCAAAAGACGGAGCTGGCCTATGAACAAGTTGACAGCTTGCGAACTCAGATACTTCAGCAACAGGGATTCATTACCGAGACCAATAAAGAGTT GGATGCCACTAAGGGCGACCTTGTTGCAGCTTTGAATGAGATTGAACGATACAAGGAGCAAATGCACAAATTGCATCAAAGTCTTGAATGTAGAATGGAT GAGCTTAGAGAAGCTGATGATGAAAGAAAGTTGCTTTCTTCAGTTGCAAAAAAGCAGCAAGATGCATTAACACTGGTTGAGGCAAAAGAAAGGGAGACCA GGAAGCAAATGGAATCAACCATTGATCTCATTCATAAATTGTTGACAATGGTTACTGATTTTGAAGCTAGAGTAAACGGAGATATGTCAAAAAATTGTTT AAGGCTCGAAAACATGAAATCTGAGTTCCGTTACATTAATAACAAAGCCAATATACTTAAAACCACGGGGTTGGTGTACAAGCAAAAGCTAGAAACAAGA TGTTCTGATCTTACAAAGGCTGAAGCAGAGGTTGATCTTTTGGGGGATGAGGTAGATACTCTTCTTAACCTGCTTGAAAAAATCTACATTGCACTTGATC ATTATTCACCCATATTGCAGCATTACCCAGGGGTCATTGAGATTCTGGAGCTTATAAGAAGAGAACTAAATGGAGAGTCTAGAAAACTTGTTTAATCATT TAATTTGACCAGGTAAATCTGTGTTTTAAGCATCACTACATGTTAATTGGTTGTTTTGTTTTCATCTTTGGATACCAAAATGCTATTATGTTAGTTGCAC TTTCTTTTTCATGTCTAACAAGGGCAACACTATAGTATACATTATTTGGTCC
• Tissue: pods
• Gene name: LI_gene_140437;
• Additional information: details;

Expression of Ll_transcript_277020

FPKM

• PAB: 0.2
• PNAB: 1.6
• PS1: 2.2
• PS2: 0.7
• PS3: 1.6
• PW1: 1
• PW2: 1.4
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_277020

• Blastp: WPP domain-associated protein from Lycopersicon with 40.89% of identity
• Blastx: WPP domain-associated protein from Lycopersicon with 39.67% of identity
• Eggnog: WPP domain-associated(ENOG411240X)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420011.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;