Ll_transcript_277016

• Id Trinity: TRINITY_DN45717_c3_g3_i4
• Name Transcript: Ll_transcript_277016
• Sequence: CCCAGAGGCATAATTCAATAGAACACAAGTCAACGATTCCTATGTTCCTGATGCCGTTTAATTTTGTCTGTTTTTTTTTAGATTTTGAAGTTCTTGTTGA AGCTTTAATCTTTATTAGAGCTTCAACTATATCTCCTTCAACTTCCACTAAAGCTTGAATTTTTCGATTCTCCATTGCATTTCAACTCCTGGGTCATTTT TTGTTCACCAAAAAATGTTATAAAAGGAAATCAGATAAAGGGCTTGCTCAAAAATGTTGATTTCTGTTTGGATGATTATGGAAGTGAACAAAGTGAAAGC ACATGAGTGAAGTTTGGAACTTCTTTGTTTTGGGACTAACCCCTTTTGTTTAATTCAGATGTTGTTTTCTGGTAATATGGATGATGGTGAGTGCTATAGT GATAATGGTAAGGAAAATGAGAGTCTTGGTGACCATATACTTGAGGAAATGGAGTCGATTTGGATAGACATTGATCGGAGGTTGGTAATCTCTAGGATGG TTAGTGATTCTGTCATAAAGGGCATGGTTAATGCTGTTGAGGAACAAGCAGCTGAGAGAATTGCTCAGAAAGAATTGGAGGTTGTCGGGCTAAAGAAAAT GCTACGTAGTTTTGAAGAGGGTTCGGATGAAACTAAAACACTGAGGTCTTCGGTAACTAATCGTGGATCGCATGAGGCTGCTACACATCATATTTCAGAT AGTGTTTTAGAGCATGGTGGACATGTAGGGTCTGATAGTCCAGAAGTTGCTGCCAAGGAGCAGTTAAAGCAGCTCAAGAAAGCGATAAATAAAATAAGAG GGTCTGGTTCCATCAAAAGAATTAGTTCAGGTTCTGACTTGGTGGGTTTAGATGGTATTCTGCAAGAGAATGTACCGGAAAGATGGATATATGTCGATAA ATCTTTTGAAAGTCTATCTGACACTCTAGACACTTTGTGCAGAAGGGTAGAAGTTGTGGATCAGTCGTCGATGGCATCACTTTATCACGAGGAACTGGAG TTTCGATCAGAAATTGAACGCATGGTGATTAGCAATTGTATCTGGAGTTTGCAGCAGGCGTTTGAACAGAAACTATGGGAGATTTATGATTCTGAAAGTA GAAATTGTTTTGACCAACACAAAGAGATCTCAAGTATGCGTCAGCAATTGGATTCAATATTTAAAGCACTCTCTGTTTCTGAGACCGGGCTGCTTACTTC TCATGGATCCTTGGAAAATGGCGAGGAATGGTGCCATAGTAAAAGGGCTGACCATTTCCACTGCAAGCTTCCAATGACTATTTCATTGCCTTCAACTTTG GAAGAAAATGGCAAACATGAAAACTCGAAGAATAGCAAGCATGAGAATGTGGATCCTTCCTTACTAAAGCACATGTCTAGAGATGAATTGATTACCTATT TTAATTCTGAGATAACCAAAATGAGAAGAAACCATGAATCTCAAGTGCAAGAGGTGACTGAAGAAAATTTCCGCCTTAGAAGGGAAGTATTGAATTTGAA AGAAAGAGGTTCTCATTCGCCAATGAAGAAGGACAAAGACTTTGATTTATTGAGGAAAAAAATCTCTGATGCCATCTCAAAGTTGGATAAAATCCTTGTT GGAAATGAGAAAGTGCATTGGTTCACTGAAAATATTGAATCTCTTGGTAGTTTAAAGGATAGATTGGATTTCTTACTCTCTGAGAATCATCAACTGAAGG ACACCCTAACGGAAAAGAAAAAGGAAATTAAGAGTCTTTCCTCTCAGCTTTCCGTTGCTGTGGAGAACTTGTCGCTGCAACAACTGACTGAGAAAAAAAT GTTACAAACTATTCAGAAGCTTGAGGATAATATAGGGGTTGCACATGCTGAAGTTCCAGTTATTCAAGATGTGTATGAATGCCTCTTTGAAGATATTGCG AGTGAATTCAGATGCATTACGGAAGAATTACATCTGAAGAACAGTATCATGGAAGAAATCTATGAAATAATTTTGAAAGATGCTGCTCACAGTCCTCAAG CTTCTCGCGAGTTGGAAATCGAGGAAGCAGATATGGAGGCATCTATGATGCAAGAACTATTGGATATTAATCAAATTATATTTAAAGAAGCTTTGGTGGA TGTGAACAAAGCATTAAAATCGGAAGCTGCTAAGAAGGAGGAACTAAAACAAGAAATGCTTATCTTGACATCAATGGTAGAAGCAAGAGAGAAGTTAGCC CAAGAAGCAGCAGATGCATTGGTACAAGAGAAGCAAAAGATGCAGTTGGCCTCTGTACAGGTTAACAGTTTCCGAACTCATACACTTCAGCAACAGACAT TACTTACCGAAACCAATGAAGAGTTAGATGCCACTAAGGGTGACCTGGTTGCAGCATTGAAGGAGATTGAACAACGCAAGGAGCAAATGCATAAGTTACA TCAAAATCTTGAACAAAAAGTGAACGAGCTTAGAGAAATTGATGACGAAAGAAGGGTGCTTTGTTCTGTTACACAAAAGCAACAAGATGCATTAACACTG GTTGAGGCAAAAGAAAAGGAGACCAGGAATCAAATGGAATCAACTGTCGATCTCATCGATAAATTGTTGACAATGGTTACAGATTTTGAAGCTAGAGTAA ATGGAGATTTTTCAAAAAATTGTTTGAGGCTTGAAAACATGAAATCTGAGTTCCGTTACATCAATAACAAAGCCAGTATACTTAAAACCACTGGATTGGT GTACAAGCAAATGCTAGAAACAAGATGTTCTGATCTTGCAACGGCTGAAGAAGAGGTTGATCTTTTGGGGGATGAGGTAGATACTCTTCTTAACCTGCTT GAAAAAATCTACATTGCACTTAATCATTATTCGCCCATTTTGCAGCATTACCCCGGGGTGGTTGAGACTCTGGAGCTTATAAGAAGAAAAGTAAATGAAG AGTCTCGAAAAGTTGTTAGTCATTTTATCTGACCAGGTTGTAATGGATACAGGTGACAAAGTTGTACATTTTTGTTCACAAAAGTTGCACACAAGTAGGA GCTAGCTGATTGTAGCTGCTGGATTTTTGATCCCTTAAAACATATATTTTGTGGAACACAGCTATTAGAAAAGAATGCAACAATTTAAGAAGTAGCCAAC ACCACACTTTTGTTTTTGCCATAAACCAATGATTTATGTTCATTTAGTATAATGATATGTTCCCTTTGCTCCTGTAAACCACAAATTAGTATTTTCTCTT TGTGATGCATAGTTTCTGTTCTGTATGCTTTGGATTAGTAGCATTCTTATATGTTTTTTTTTGTTAGAATAAATCTGTATTGAGTTTCTAGTTTTGTATT ATTGACATAGGTGTATGACAATTTTTTTTTAATTTGTGAACTAGCCATTTCATAATAGTCACCTTGTGTGTCACATGGATCTAAAGGTCTATTTACGAGT TAGTTTTTTTTAA
• Tissue: pods
• Gene name: LI_gene_140439;
• Additional information: details;

Expression of Ll_transcript_277016

FPKM

• PAB: 0.4
• PNAB: 4
• PS1: 4.1
• PS2: 2.5
• PS3: 3.8
• PW1: 6.1
• PW2: 3.6
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_277016

• Blastp: WPP domain-associated protein from Lycopersicon with 41.03% of identity
• Blastx: WPP domain-associated protein from Lycopersicon with 40.63% of identity
• Eggnog: WPP domain-associated(ENOG411240X)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425667.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;