| Id Trinity | TRINITY_DN45725_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_276759 |
| Sequence | GTAAAAAGGTATTGGCGGGAAAACAATGTTGTGATAAAACTTGGGTTCGGAAACAGAGCGAAAGAAAATATCAGAAATCAACCGCGAAACGCTTCTTTTG TCGTCGTTTTCATTCTCCTCCTATGGCGAAAACCCTAACTTTGATTCACGAGATCGAATCTCTCGTCTCCGATAATCTTCAAGTGGTTTCTTATAAGTGG CTCAGTCGAAATTATATGATCTCATCCAATGAAGCAAAGAGGCTGCTTCAAGAGTTTGTTGAAAAACACGACGGTGGGTTGGAGGTGGTGTATGCCTTGT CTGGCTGGTTAAAGAGCAGCCACCCAAGTTACCATGTAAAGCTTGTTACTGCTCCAAATCTTGCAGATGCACAACAAGAATTTGATGGGAATTGCTCAGT TCAAGTATACAGTGTGCAAGCTAGCATTCCAAAGGATCCAGCTATGCTTTGGAATGCAGAATTTATTCAAGCAGAGGAGCTCTCCAAGCAGCCCTTTTCA GTTGACAATTGTTTGAGAGATAATAGGTTTTGTGGGATCTCTAGTTCCTTTGTTTCTCGAAATATAGATGGCCAAACAGTGGTTTCTGCAGCTACACACA CAAAACCTGCAGTAAGCATGGATTCAACAAAGAATAACATAGTTTACCAACCTCCAAAAAATCTAGCACATGATTCTATTCCCAAAGTTCTCAAACCACA GAATGTGATGAAAGATGTCAAAGGTGAAAGCAATGTTACTGGGAGTGCAGGAGTTCATGATCACATCAAAAAACCTACTGAAGGCAAAGAAAAGGTTCTT CCCTTACCCACTGGCAAAAGAAAAGCACAAGCTGATAAAAGTAGTTCTGTTACTGGAGGCTCATTGGCAAGTATTTGGGGTCGTGCATCTGCAAAACCCA AGCCTTGCTCCCCGCCAGCCGAAAACAATAACATGGCTTCAAAGCCTACTGTAGCAACAGAAGGCGCCGAAACTCATGCTTGTGAAGCAGGAGAGGATGA CAGCGGTGATGATATGGATGTTTCTGTAAGAAGATCCACCAATAGGAGAAGGGTTGTCTTTGATTTTTCAGATGAAGATGAAGATGCTGTCAATTTAGCA TCACCTGAGCCAATCAAACAATCACCTCTAGATTCCAGACAAAATGATAAAAAATCATCAGAGAAAGCCACCTTGAAGTCTGACAAGCAGATAGAAAGTA AATCCAGGGTTAAGGAAGAGACAGGAAGTGACCAAAAAGCTAACCAACCATGGAGAGAAGATTTATCAGTTATCAACAAGTGCACAAGTACCGGAAAACC TTCCACTGAGAAGGTGGAGAGTCATGCTCCTGAAATTTTGGTAAATAAGGATAGTCCAAACAATACTGCTCCAAGTTCACCTAAAAGAAGAAGAGTGATG AAAACCAGGATTGATGAACGAGGGAGAGAAGGTACTTATGTTTTAAATGCATCGTTTTCACTCAGAAGCTTCTTTTTTTCCTAGTATAGAATAGAAGCCA ACATATATATATTTGTGCTGTGTGAATATAAAGATTACTTTGGAACTTGCATTTTGAACTTAGTTCTTTATAAAGACATCAACTTTACACTTGTGCTACA ATGATTTTAGGGTGATATATATCAAGATGTTTAGTGAATCTCTTTAATCCTAAGTGTTTCTATATTATGTGTTTGTGTTTTTGTCTTGTTTATGTTTTGC TTCTCTCCAGTAACTGAAGTAGTGTGGGAGGGTGAGGAGACAGAAGCAAAAAAGGCTGATAAGGCTACAACAAAGAAATCTGACAACAATACTACCAATG CTGTCAAAAGTGCTCCAGCGACTAAGAAATCAGCAAATACAGTTTCCAATCCTACTGGTAAAGGAGGAGCCAAGAAAACTGTTAAGCCCAAGGATCCCAA ACAAGGCAATATTCTTTCATTTTTCAAGAAAGTTTAAGATCTTTAGAAAGAATTATATTATTGAAGAAATCATCCTTGCAGCAGGATCATTCATCAATTC TAGTCCATCCATGATTGTGAGGATTTTGCATTATGTAGATTAGTTCTCTTGATGGTTTCACTGGAATCTGAATGCAGGATTGTTGAAATACTTTAATATG TATGATTTCCCTATGCATACTCTTGCTTTAAAAACTCCAAACCTTTTTCACCTGTTCCTATCTCACAATGATGTTTTTTTGTCATATACATAATTTCAAA AAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_140469; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_276759
| Blastp | DNA polymerase delta subunit 3 from Mus with 34.17% of identity |
|---|---|
| Blastx | DNA polymerase delta subunit 3 from Mus with 34.17% of identity |
| Eggnog | nucleotide-excision repair, DNA gap filling(ENOG410XSD1) |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0000741) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425709.1) |
| Pfam | DNA polymerase subunit Cdc27 (PF09507.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |