Ll_transcript_277063

• Id Trinity: TRINITY_DN45729_c6_g1_i6
• Name Transcript: Ll_transcript_277063
• Sequence: TAAGCAAGAACAAACCTTTGATTACTTTTACATCAATGTCTCTCACTCATTTCTCTCCTCATAAATGCAAAAATGCAAAATCCCAACCAAAATACAACCA CTGCTTATTTCCACAACCATTTCAACACTACTGAGTTTTCTGCTTGAAGTTGAAACCTAGCATCCAGTGGTGCAGAAGTTCTTTTTTCATAAGTTAAATG GGTGGTAGCAAAGTATTGCTAACCTACAGAAGGAAGCGGCGATATCTAAAGAGCTTTACTCATGAGAATTGGCGTCACAATTCATCTTATGAAAATGTCC TCAATTCTCTATCTGCATCCGATAAACAGGAGAATGTAACTGCGAAGAATTCATCAGAGAAACTGAAAGTGGAACCAGTGGATGCTAGTGATGGGGGAAG GCTGTGCAGTGATGACACAGAACAGCAAGGGTGCTCATCACCACTTCCAGCTCAAGAGCATGGCAGACCTCAGACAGGGGAACACGGAGATTATGATGCA ACAGAAATGATGGTTAGTAAACAGAAATCAGTTTCAACAAGGTCATGTGAGGATACCTCCGGCAGGGAGGCTTTGGAAATACCTCCTGTAGAAAAGGCTT CACAGAAAGGATGTGACATTCGGAAAGTTTCACATGCCAATGAAAGCTCTAGTAATAGATGTGACAGTTGTTCTGATAAAAAATGTAGTTTCCCATCAGT TGAATTGAATGCTGGGAATGGTTTCAATTTAGTAAGCTCAGAAACATTCATTGCTAGGAAATGCAGCTTTGCATATGCTGATGGTTCTCCAATTTTGGAT AAGCCAAAGGAAGAACTTGCTGATTCACTCTCCAAAGATGATTTTAGGAACTTTTCTCCAACACAGAGCAACTCGATCAGATCATTAATCACCTTTGATC GATGTTATAAAAGAAAAAGGCGGTTGGATAGGAAGACTGATACAGAAAGCAATGTTTTGCATAAGAAGGGAAATGCGTCATTGTTAACCAGGTGGAGCAT GCTTCCAAATGGTAATGCTTGTTCTTGCAATGAATCATCTTGTAAGAGATGTTCTGTTGATAATGTAGAAGATATTCATCATCCAATGGAGGTTTCAAAA AGAGAGAAGCCACTGACTGAAACCCAAGGTGAAATATCTTGTAGAAATTACTCAGTGGTTATTCTGACAGACCTTAATCAATCAGCTGAGTTTGCAGAAA GCGGGGAGATTTATCAAGCGCAAGAAGTGAAAAATGACTCTCCCACCACTTATGAAGCTGTTTCCAAAATCGGTTTGACTTGCACAAGCGAGCAACTGCA TCACGGGGAAGACCTGGCAAAAGATGTCTCTCCAAGAGCTGGACAAGAAATACCAAGGCAGAGTTCCTGGGTTGACAAGAAAGCCCAACATCTTCCTAAA GATTCTGAAGGGGTCTCTTTAAATGTTGATTTTAGAGATCCCTGTCTTTCTATCACAATTGCTGATGAGAAATTAGAGGAGTCCCAGCCCTTTTTAGGAG ATAACACTCAGAATTTTCTGAGCGACGGTGTAAGGGAAATTAGAGGACACTTGGACAAGCATGTTATCTCTGCAGAAGATTGCACTGTTGATTTGGAATT GGGTTCTGTCAAGCATCCAGTTTATTCGAAGATGAGAACTGTTAGGGGCTCACTGGACTCAGAAAACATTAGTTCTGCCATTGCCAAAGATGAAGTTTCT CAACTGGAGTTGTTTGACTCTAAACATGACAGAGTTGGAACATTGCTTTCCACCCACCATACAAAGCTGATTTCAGATGAGAAGCCCTTCGATAATTTTT CTATAAGTATCACTCAACCTCAGTCGGCTGCTTGCTTGATGTCAGACAAAAGAATGGATCAACCAAAACTCATGCCAGACGTTTCTCTTTCTTTGGGTTT ATCTTTATCCATGGATCTTAAGATTGGAAGCTGTGAATCCATCAATTGCTTCTCGGTGTTGCCTATGTCAAATTCAACCATGGAAGCCCGAGAATTTTTC CCAGATGGATTGCATCAATCTTCACCAATCCAGAGACCATTGCTTCTCACACACAAAATAATGCTAAATGGTGTGAGGAGAGCAAGAGCTTTAAATGAAG TATGCAATTTACAAGAACATTCGATGCTGTCTCCTCTCATGTGGTCTGAAGAGGAGCTGGATTTTCTTTGGATTGGTGTGAGGAGACATGGTAGGGGCAA CTGGGATGCTATGCTAAGGGATCCGAGATTGTGGTTTTCGCCGTTGAGGGTACCAGGGGACCTTGCTGAGAGGTGGGAGGATGAACAATTAAAACTTTTG AATGATTATGATGTTCCACAGTTCAACTATCCAAAACCAAAAACTACGATTTCGGAAGGAAACTGTTGTTTTTTAGATCCCAGAGCACATTTTTGGAGAG AAAATACAATGGATAAGACCCAGCTGTCGCTTGGAGATGTATATTCTCACAAGGAGAGTAATCACCCGAAGAAGCCGCATGCGGAATTAAATTTTCAAAC TACTCCGAATCTAGACAGTCATAGGCCAACTAGTCACTGGAGCATGCCTAGGGAAAATTCCTATTCAAATTATTTACCTTTTAACTGTTTGTCACAGAAG AATAATTTGCCTCATTGGCTTAAAGAAGCAGTTTTTGGTCCTCATGCAAATTCAATTGAGCCAAATTTATCTGTTGCTGTTTCATTGAGCTCTCATTCAG ACATGCTGGGAACTACAGAGCATTCCTTTTATGCTAGTAAGCCATGCTTTCTGAATCAAAATAGGTCAGGTGGTCCAAGAACAAAGGACCTACATAAGTC AAATACTACAGAATACTCAACCTATTCAAGAAGAAAATACAGGATGGTGAAAATTAACAAGTCCCTAGAGCATAATGTCAAAAAAGCACATGACTTGATC ATTATTGATAGTGATGCATCTTCTGAAGAGACCATATCTGATGATCATCTTGCCAGGTTGTAGCTCTGTAAAATGCATTTGATGTTGATAAAACTACTTA GGGTCTGATTGCGAGTTAAGTTTTGGTGGGGAAAAGAAAAGAAAGGCTTCAGAGTCATCTCAGAAGTCTACTTAATTACTCATAATTTATCCTCTTTCTT TTTCCCTCCAAAATTTAACTCGTAAACATACGACTGTTAGAGATATAGGAATGTTGTACTTGAATATTGTATAGTTTTGTAGATTAGTGCTACTATGAGA ACTGTTGAATTATGTTTATTTTACATCCCAATTGAATTTTTATTAGCTTGCATATACTTGAAAGTTTTTTTACATGGCTGCATTAAAAAATATTGATTTT AAGTGATTGTAAATCCACAATGTAAAAAGTATTTCAATATTAGTGCG
• Tissue: pods
• Gene name: LI_gene_140505;
• Additional information: details;

Expression of Ll_transcript_277063

FPKM

• PAB: 0.4
• PNAB: 3.7
• PS1: 4.8
• PS2: 3.8
• PS3: 4.9
• PW1: 1.2
• PW2: 2.5
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_277063

• Blastp: Protein CHROMATIN REMODELING 4 from Arabidopsis with 65.38% of identity
• Blastx: Protein CHROMATIN REMODELING 4 from Arabidopsis with 65.38% of identity
• Eggnog: helicase(COG0553)
• Kegg: Link to kegg annotations (AT5G44800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453062.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;