| Id Trinity | TRINITY_DN45729_c6_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_277066 |
| Sequence | TAAGCAAGAACAAACCTTTGATTACTTTTACATCAATGTCTCTCACTCATTTCTCTCCTCATAAATGCAAAAATGCAAAATCCCAACCAAAATACAACCA CTGCTTATTTCCACAACCATTTCAACACTACTGAGTTTTCTGCTTGAAGTTGAAACCTAGCATCCAGTGGTGCAGAAGTTCTTTTTTCATAAGTTAAATG GGTGGTAGCAAAGTATTGCTAACCTACAGAAGGAAGCGGCGATATCTAAAGAGCTTTACTCATGAGAATTGGCGTCACAATTCATCTTATGAAAATGTCC TCAATTCTCTATCTGCATCCGATAAACAGGAGAATGTAACTGCGAAGAATTCATCAGAGAAACTGAAAGTGGAACCAGTGGATGCTAGTGATGGGGGAAG GCTGTGCAGTGATGACACAGAACAGCAAGGGTGCTCATCACCACTTCCAGCTCAAGAGCATGGCAGACCTCAGACAGGGGAACACGGAGATTATGATGCA ACAGAAATGATGGTTAGTAAACAGAAATCAGTTTCAACAAGGTCATGTGAGGATACCTCCGGCAGGGAGGCTTTGGAAATACCTCCTGTAGAAAAGGCTT CACAGAAAGGATGTGACATTCGGAAAGTTTCACATGCCAATGAAAGCTCTAGTAATAGATGTGACAGTTGTTCTGATAAAAAATGTAGTTTCCCATCAGT TGAATTGAATGCTGGGAATGGTTTCAATTTAGTAAGCTCAGAAACATTCATTGCTAGGAAATGCAGCTTTGCATATGCTGATGGTTCTCCAATTTTGGAT AAGCCAAAGGAAGAACTTGCTGATTCACTCTCCAAAGATGATTTTAGGAACTTTTCTCCAACACAGAGCAACTCGATCAGATCATTAATCACCTTTGATC GATGTTATAAAAGAAAAAGGCGGTTGGATAGGAAGACTGATACAGAAAGCAATGTTTTGCATAAGAAGGGAAATGCGTCATTGTTAACCAGGTGGAGCAT GCTTCCAAATGGTAATGCTTGTTCTTGCAATGAATCATCTTGTAAGAGATGTTCTGTTGATAATGTAGAAGATATTCATCATCCAATGGAGGTTTCAAAA AGAGAGAAGCCACTGACTGAAACCCAAGGTGAAATATCTTGTAGAAATTACTCAGTGGTTATTCTGACAGACCTTAATCAATCAGCTGAGTTTGCAGAAA GCGGGGAGATTTATCAAGCGCAAGAAGTATGTTTTCTTTCTCATCTTCTTGGTGATTTCTTACAAGTTATAACTCGTGGTTTGCTGCAGAAATACCTTTT GGCTTTTGTATTATAATTATAATTCGTACACGCCAAATGTCTGTTAGAGTAAATGGGCTTTATGTTTTCTATATTGTCCAAGTCAGTATAAATGAATCTA GGCTCATATTCTCAACCGATGTGCGCCTTTCATACTTAACACACACCTTCATGCATGCCTAAGAGTGAACATCTAGAGCATTAAGTTTGTAAGAATGAAC ATTTGCGGGTGGTCAAATGTTGGAGTAGACCTTGATATCATGTTAGGATAAATGTACCTATGTAACCACCCAAAAGTCAGAGGGGGTGTGGGGGGATTAT GCAAGTCATTATAAATAGCTCTTGGCTCATATTCTCAACTGATGATTGGCACTTAACAATGTCTTAGGAGAGAATTCTAATTTAGATAAAAATAAATAAA TTTTGTATTATAGTTTTGAGCAGTTTTACAATAATCCCTTTTTCGCATTCCGTACTCTATATATGTATGACTGCCCAGTAAAACTTGTTAAATATCAATC TCTATCATTGCCTGCTAGGATGCTTTTTGAAGTAGAAAGCTGAATAGAAGAATGCGAATGTGTCAATTAGAGTCACCTCATCATTTGTTATTTGATGTAA TAATACCATGAAAAAAGTGTTCTTAATGAAAGCACTACACGCGGTTTTTGAGGAAAAGGCTCATGTGTGGTGCATTGTTTCCTGCACGAAGTTCAGCCAA TTAGACAATCTTGAGTCATATATTGGATAACACAAATCAAGCATGAGAAGGATTCTTTCTGCTTATTCATATTTGAATTTTATGAAGAACATGAACCACT TTGAAAATGATGTTTTGAATTCTTTATGCACAAGTTCTTGAACTAGTGTATACTGTGGAGCATTATTTTTGAGTTTGGACAACCTATTATTACAACAAAA TGTAGGCTGTCTGTATTTCTTTCTGACCTAAGTAGTTATTCATTGATGATTTTGTGCCTTACCTACTTGGATATATAGGCTGTGTAGTCTCTTTTTTACT TGATAATAGCTTTCAAGGGCATATGTAGTTGGAAAGAAATCAGTCAAAAGATAGATAGCTCAGAAGGCATTTGGAGTTAAAAGTGTTGCATATGAAACAG CCCAAGTTAGACAAAAATTAACCTGCTTAGTTTTCACAGTGATTTATGACAAATTTTGAGTCTTGCACTCAAGCCTATCAGTTACAGGCCTGATGTCAAG TACAACGGTTTTAAATTTTTTGACAGGTGAAAAATGACTCTCCCACCACTTATGAAGCTGTTTCCAAAATCGGGTATATTTTTGTAGAACTCAATAAGCT GTTTGATATTTTTTTAAGAAAAAAAAACATGAATCTGGTGGGTGGAAAGTCATTAATTGCTGGGGGAAATTTTTATTATATTAACTTGTTCATTCTAACA GTTTGACTTGCACAAGCGAGCAACTGCATCACGGGGAAGACCTGGCAAAAGATGTCTCTCCAAGAGCTGGACAAGAAATACCAAGGCAGAGTTCCTGGGT TGACAAGAAAGCCCAACATCTTCCTAAAGATTCTGAAGGGGTCTCTTTAAATGTTGATTTTAGAGATCCCTGTCTTTCTATCACAATTGCTGATGAGAAA TTAGAGGAGTCCCAGCCCTTTTTAGGAGATAACACTCAGAATTTTCTGAGCGACGGTGTAAGGGAAATTAGAGGACACTTGGACAAGCATGTTATCTCTG CAGAAGATTGCACTGTTGATTTGGAATTGGGTTCTGTCAAGCATCCAGTTTATTCGAAGATGAGAACTGTTAGGGGCTCACTGGACTCAGAAAACATTAG TTCTGCCATTGCCAAAGATGAAGTTTCTCAACTGGAGTTGTTTGACTCTAAACATGACAGAGTTGGAACATTGCTTTCCACCCACCATACAAAGGTACAT AAGGATGCCTATGCTTGCCCCTCACTCGAAAGATGATATATTTCTATGTTTAATGAAATGGAATTACAAATTTGGAAATCAACAATTTTTAATATTTCTA ATATGGGAAGAGTTAACCAAAGTCAAATGGTCATTGCTTAATCAAAGCTTAACTGGGTTTTGAAGAGTTACTGCATTGAAATTTTCATGAAAGGGCGAAG TGAAAAGTTCATGGGTTTCATCCCAAGTGTATCACTTCTCATCCTTCTCTGCTTGTTTTTATGTGGGTGCTTGTGAATTTCCACTTTGTAATTCATGTTT TATGTTGCCTTCTTAAGATGATAGTGTACCCGAGGATATGTGATTCTTGTTCTCTTGAATATCCAGCTGATTTCAGATGAGAAGCCCTTCGATAATTTTT CTATAAGTATCACTCAACCTCAGTCGGCTGCTTGCTTGATGTCAGACAAAAGAATGGATCAACCAAAACTCATGCCAGACGTTTCTCTTTCTTTGGGTTT ATCTTTATCCATGGATCTTAAGATTGGAAGCTGTGAATCCATCAATTGCTTCTCGGTGTTGCCTATGTCAAATTCAACCATGGAAGCCCGAGAATTTTTC CCAGATGGATTGCATCAATCTTCACCAATCCAGAGACCATTGCTTCTCACACACAAAATAATGCTAAATGGTGTGAGGAGAGCAAGAGCTTTAAATGAAG TATGCAATTTACAAGAACATTCGATGCTGTCTCCTCTCATGTGGTCTGAAGAGGAGCTGGATTTTCTTTGGATTGGTGTGAGGAGACATGGTAGGGGCAA CTGGGATGCTATGCTAAGGGATCCGAGATTGTGGTTTTCGCCGTTGAGGGTACCAGGGGACCTTGCTGAGAGGTGGGAGGATGAACAATTAAAACTTTTG AATGATTATGATGTTCCACAGTTCAACTATCCAAAACCAAAAACTACGATTTCGGAAGGAAACTGTTGTTTTTTAGATCCCAGAGCACATTTTTGGAGAG AAAATACAATGGATAAGACCCAGCTGTCGCTTGGAGATGTATATTCTCACAAGGAGAGTAATCACCCGAAGAAGCCGCATGCGGAATTAAATTTTCAAAC TACTCCGAATCTAGACAGTCATAGGCCAACTAGTCACTGGAGCATGCCTAGGGAAAATTCCTATTCAAATTATTTACCTTTTAACTGTTTGTCACAGAAG AATAATTTGCCTCATTGGCTTAAAGAAGCAGTTTTTGGTCCTCATGCAAATTCAATTGAGCCAAATTTATCTGTTGCTGTTTCATTGAGCTCTCATTCAG ACATGCTGGGAACTACAGAGCATTCCTTTTATGCTAGTAAGCCATGCTTTCTGAATCAAAATAGGTCAGGTGGTCCAAGAACAAAGGACCTACATAAGTC AAATACTACAGAATACTCAACCTATTCAAGAAGAAAATACAGGATGGTGAAAATTAACAAGTCCCTAGAGCATAATGTCAAAAAAGCACATGACTTGATC ATTATTGATAGTGATGCATCTTCTGAAGAGACCATATCTGATGATCATCTTGCCAGGTTGTAGCTCTGTAAAATGCATTTGATGTTGATAAAACTACTTA GGGTCTGATTGCGAGTTAAGTTTTGGTGGGGAAAAGAAAAGAAAGGCTTCAGAGTCATCTCAGAAGTCTACTTAATTACTCATAATTTATCCTCTTTCTT TTTCCCTCCAAAATTTAACTCGTAAACATACGACTGTTAGAGATATAGGAATGTTGTACTTGAATATTGTATAGTTTTGTAGATTAGTGCTACTATGAGA ACTGTTGAATTATGTTTATTTTACATCCCAATTGAATTTTTATTAGCTTGCATATACTTGAAAGTTTTTTTACATGGCTGCATTAAAAAATATTGATTTT AAGTGATTGTAAATCCACAATGTAAAAAGTATTTCAATATTAGTGCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_140505; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_277066
| Blastp | - |
|---|---|
| Blastx | Protein CHROMATIN REMODELING 4 from Arabidopsis with 65.38% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453060.1) |
| Pfam | - |
| Rfam | - |
| GO | - |