| Id Trinity | TRINITY_DN45741_c2_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_276212 |
| Sequence | GTTTGAAAAAGTCTATGCTTTATCTCCAATGAAAAACAAACGCCCAGTCAGTTGAGAATAAAATGCACACGTACACGCACAAAGTGGTTTTTATATATAT CTCTTTTTGGCTTTTGCTTTTGGCAGAAGAGATTTATTGAAACAAACCAAAACACACACCATTGTGCGCAACAACAGAGAGAGAAGAAAAGGTCTTCTCA TTTTGGCTTTTGTTTTTAGAGATTGAAATATTATTCAGGGACTCATTGGTTCCACGGATAAGTATTGATATAACAAGGACCAGTCTGAGTGTGGATACAC GTGTAGGACCTTGATATGTTTGAAGGGGAAAATTTTCTAAAGTCATCACAGTCTGCTGCTGAGGTATTTTATATAAAAAAGTTTTTTGCCTCATTGTTAC CTGATATGCATGTTTTAACACAAATAGATCCGTTATTTTCTGCAATGTATGTTAGGAACATGCATGTTAACTTTCATTTTCTCACACATAAGTCGTGGAA CTCTTTCACGACTTCCACACATGAGATTTCTACCCAATTACTGGTTGAAAATCAATGACTAAGATTTCTAGGCAAATGATCTAACGCCAGATAATCAGTT CCTATCCATGTAGGTTAGCTTTGACCTTTCTTTTAAACTAATTTAGTCCACACATTATACAATTGTGGTTATCCAAATTATGTTAACTCATGTTGGTCTA TCTATCTGTTCACTAGTAATTGATGATGGCAGAAACTACGAAGAGGTATGCAGTAGTGAGTGGTGCAAACAAAGGAATTGGATTAGAGATAGTTAAGCAG TTGGCTTCAGCTGGGATCAAAGTGGTGCTTACATCAAGAGATGAGAAGAGAGGTCTTGAAGCATTGGCAAAACTCAAAGCCTTAGGTTTATCTGACTTTG TACTTTTTCATCAGCTTGATGTGGCTGATGCTGAAAGTGTACTTATTCTGGCTGATTTCATCAAATCCAATTTTGGCAAACTTGATATTCTGGTTAACAA TGCAGGGGTTGGAGGAATTGTAGCTAAAGACAATGACTTACTCATTTCAGCAATCAATAATGGTGGGGTGTTGTCAGAAGATGATGCAAGAAAAGCAATG ACTCAAACATATGAATTAGCTGAAGAATGCTTGGAAATAAATTATTATGGTGCTAAAATAACTAATGAATCCCTTCTACCTCTCCTCCAATTATCTGATT CACCAAGAATTGTGAATGTATCATCCAGCCTGGGGATGTTACAGGTAGGCTATTACTTTTTCTGTCCTTAAATTCTTAGAGTCTTTGCCTAAAATCTGAT TGTAGATAGTAAAGGGTGGTTATTGGTTAAGTTTGGAATTCTAGTGTTTAGATAGAACATTACTGTGAAATTTGGCTCAGAAATTACTAAAAATATTAAA TACACCTTGATAACTAGCGTAATGTGGTATTCCAAGAGTGGGTTAGTGGAATGAGGATCACCTGTCCCACTTTTTCATGTCCCATTATGTCCCAAACCAA TTAGAAATTGTCATCTATTTAAAAACAAAAATTATAAAAACATAAAATATTTTTTTTGTTATTTGGTGGGATTTGATTGGCTTGGTACATGGGGACATGA TTATTTGGGTACAGCATATCTGCGTTCTGGTTAGTGTAAATGTGTAATGAAGAAAAAGTTAACGAGTTAAAGAATATATAAGTGAATGAACTTAATACCT TAAGGTTTCAGGTCAAGATATACTTTCAAACTTACTTACATGTTTGTTTTACTTAGCTCATGAGAATCACCAATGATTTAGTTATTATGATATTGGAGTG ATATCTTCATTCTCTCTCCTTCTCTTTCTCCAAAATTTTCATAGACATATCTTATGACCCTTTTGTGCTTATCTATGTCAAAATCAGTATGTGTCAAATG AATGGTCTAGAGGAGTCTTGAGTGATGCTGATAACCTTACAGAAGAGAGAGTAGATGAAGTTTTAAAGGGTTTTCTCAAAGATTTCAAAGAAGGGTTGTT AGAAATCAAAGGGTGGCCAAAGACTCTAAGTGCCTATATTGTTTCTAAAGCTGCTATGAATGCCTATACAAGAATACTTGCTAAGAAGTACCCTAATATA TGCACCAATGCTGTTTGCCCTGGCTATGTCAAGACAGATATAACCTGTAACACTGGCCTCTCCACAGTTGAAGAAGGTGCAGCTTATCCTGTGAGGTTAG CATTGCTTTCCAATGAGACTTCATCTGGCCTATTCTATTCGGGGAGTGAAGTCTCTTCGTTCTGATCTTGAATAAGTTATTGGAATAATTTCATCGTACC AAAGACTTAAAAAAGATTTCTAATTATATAAAATTACACTCATGCTATATATTTTGTACCATTCACAGCAACTTACACCCTTGCTCTCGGTCTTCCATCG GTCACTGGGTTCAGGATCACTGCATGATTAGTTGTGATTCATGATTGATATGTGGTACATTATGTCTTCTTGATATATTAATAAGTTTATAAGAATAAAT TTTGATACATTTTATTCCATGTAAATTATTTTTGTTGAGAGGATCACTGCATGATTAGTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_140550; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_276212
| Blastp | (+)-neomenthol dehydrogenase from Arabidopsis with 61.14% of identity |
|---|---|
| Blastx | (+)-neomenthol dehydrogenase from Arabidopsis with 56.57% of identity |
| Eggnog | Dehydrogenase reductase(COG1028) |
| Kegg | Link to kegg annotations (AT3G61220) |
| CantataDB | Link to cantataDB annotations (CNT0000966) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443635.1) |
| Pfam | short chain dehydrogenase (PF00106.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |