Id Trinity | TRINITY_DN45754_c2_g1_i6 |
---|---|
Name Transcript | Ll_transcript_276420 |
Sequence | CCTGGTCCCACACATGGGTGGACATAATAAAAACCTTATACACATACAAATACTTAACCAAAGTATACTTTACACATTTTGTGATTGCTCTTCCCCATAA ATACGTCTTTCTATCTTTTCCAACACAACTTAATTTTATTCTCTCTTCCCAACTACCTCTTTTCTTAACCCTTTTTTTCAGTCTCTATAACCTTTTCTCA TATATCTTCCTTTGATCTTCATATAATTGCATAACCTATAAAGAAATGAAGGTATGATTCCTTCTTTTTCTGATTTTGATTCTTCCTTTTCATGTTCTTT TTGTGGGGTAAAAAGGATAATTCACTTCTTAAACTTGATACTGAACTTTGAATCATTGTTGATTCTTCATGAACTTTTATGCCATACTCTTTTCAGTTCC TCTGTTTTTTCCTTATATAAAATCATGGGGTAGTCTGAAATGAATTTTAAGTCTTTGGAATTGAATTTAAAACCTGGATCTATATGTGGAAGGTTTAGAT TTAGCTTCTGCAATTTGGTATATAATTTTTGTTTTCAAGTTTGTGTTTTTTTTATATATTTTTATGGCTGGTTCAGATTTTACATGTTCTATAAATATTC TTTATCAGATTGAAAGGTTATCTGAAATATTTTTGGTTTTTGGAATTTGGGTTAAATCATTATCTGTTTTTTCTTACAGAAATTTGTACTAAAGTTAGAT TTGCATGATGACAAGGATAAGCAGAAGGCTTTGAAAACAGTTTCAACACTTCCAGGTACAAAATCATCGTTGTTCTATTATTCAGTTTATGTTGTTATGT TCCTGTTGAACTTTCTTGATCTAGCTTTCTATTATCTTGAAAAATGAATTTTTCAAAGTCAAGAAAAGACAGTAGCAGAGGGTTGCACGTTTGGTTAATT GGTTTTTTCACTTTTTTATTTTTATTTACTTTCATATTTTAAAATACATAAAAAGATCATTAAACATGTATTTTTGTTTTATCTTAAAACATTCAATACA CTTTTTGACATTTGACAAAATAAAAATCTAACTATCATAATTTTAACTTAATTTTGATAAAATAAATTATAAATATCATTTTCCCTTATAATCTACCACT GGACTATACTGGACTTAGGTAATTAATGTTGTTCTGTATTTTGTTCACTGATACAAAAACTTTTCCTACATAAATGTCTCAGTGTTGAACTCTCAAATCA AGGGAATGTTAGACAACAAATAAATTATTATAATTATTGTTGTTTTAACAAAAAAAACTGTGTATAATTATTATTTGACGTACATTTAGTTTTTTTTTAA ATTGTTGTATGATATAATACAAGAATCTTTTGGGTATCTTAAGAATATTACACTTTATCTTAAATCTTATCCTAGAAATTCTAACATTATTTCCCAATTT GCCTTCATTTGGTATGTACTTAATAAGTATATTTGTTTGGTTTTTGCTACATGCTATAGTTGAAAAGATCTAGTAAGCTAGATGAAAATCTTCTGTACTT AAATATATCCTCAACCATGTACCAAACTAATCAGAATAAATAAAAAATAAATAAAAACATAAATGATTGATTTTTTTGACTGATGTGGCATGTTGCTGTT CGTTTGGGACAAAATTTGTGACAACATATCCTTGTCCCTACTAAGCTATCATTTTAAGTAGATGAAGGTATTAGTTAACATGCTAACATATTGTCCAATG GCTATGCTAAAAACCATTAAAAATGTCTTTTAAAGAGTCAATAATAATTGAAAATGAATAATCTAATAATGTATAAAACTCTTACATTGTCGGTATATAT ATTTTTTTTCAGTTATGATATGGCATTTTCTTTCATATATTTCAAGGCAACTCTTGTACATATTCTAAATTTCAACTAATTCACATAAATGTTCCCAAAG GATGCACTTGAGGTTTGGAGTATAGTTTTGGTACAAATGGCTGAATCTTGCATGTAAAGACATTAAGGGTTGTAGTATCATCTCATCCTATATAAAACTA AAAATGTCATCTCCTACTGTTTGTTTTTGATGTACTTGCCTCTACGATATTGGATAAAATTCTAACTCATATACCCGGTAACAATAAATTTCTGCAATCT ACTATAGGTATTGATGCCCTCTCAATGGACATGAAGGAGAAGAAACTAACAGTGATAGGGACAGTAGATCCAGTGAATGTGGTAAGCAAATTGCGCAAAT ACTGGCACACAGACATAATAGCAGTAGGACCAGCCAAGGAGCCAGAAAAGAAAGAAGAATCCAAGAAAGAAGAACCTAAAAAGGTTGAAGAAAAGAAAGA GGAAACTAAGAAGGAAGAAGGTAAGAAAGAAGAGAAAAAAGAAGAGAAGAAAGAAGATGAGAAGAAGAAAGAACCAGCTCCTGACCCAGTTTTGGAGCTA GTTAAGGCTTATAGGGCATATAATCCTCACATGACAACTCATTATTATGTTCAAAGTATGGAAGAGAATCCTAATGCATGTGCCATTTGTTGAATTGGCA TGATGTTTAAACATGTTGGAAAGACAAACTTTCTGAACATGGAACCAAGAAGATTGGAACTCTTTGTATATAGTTAATATGGTTGAGTTGTTGAGATGTT ATATGTGATGTGAGGAATGGGGAATAAAATTTTGGGAAATTTGTTTTGGAACACAAATATAATTTGCACTGTTTTTTCCTGTAATAGATGTTATATGAAT GTATCAACTATCAGAATCAGTAATCTCTATGTTTACACAAATTATCTATATTTTTTGGGAATGAATATGTCCCTAGTTGCTGTCTAGTGATGTAAGATTC TGCTACACCTCATAATGATAGAAAAGTTAAGGATTTGATTTCTTTGAGCGACACTTGTTGGAAGGTTAGAGGGCAACCATCTATCCTGAAAAAGGATTAG TTTCTTTTCCAAAAGGCTTAGAAAATACATTTGGTAGTATAAAAACTCCTTCTTGCAACATATGTGTGACAAAAGATTGGATGGGTAGATGGCGAAGGTA TTGATCCTAAGTAGTGGGGGTGTAAGAGGTTGTGGTGGTATCTCACCCACAACACATACTATCATACTAATATTTACATTCAAAAAATTGCCGATTAAAA AAAGAAGATTGGA BLAST |
Tissue | pods |
Gene name | LI_gene_140604; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_276420
Blastp | Heavy metal-associated isoprenylated plant protein 39 from Arabidopsis with 55.56% of identity |
---|---|
Blastx | Heavy metal-associated isoprenylated plant protein 39 from Arabidopsis with 84.09% of identity |
Eggnog | heavy metal transport detoxification protein(COG2608) |
Kegg | Link to kegg annotations (AT1G01490) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019454649.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |