| Id Trinity | TRINITY_DN45755_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_276768 |
| Sequence | GGACTACTTGCTTCCACAGAAATTTCATCAATCTATGTCCCTACCAACTTTACCAAATGCATAATAATGAAAAACGCAGACCATAATTATGTAGCTATGA AGCGAATTTTATAATATAACTTGGCCATCAAAGACTTTTATCTAAATCTCTTGCTTCTTGGAGTCATTTTCTTTATTCAAGGTGCTTAGATCTCTATAGA GTTTCTAGAATCAAGAAAGATTGTTCCAACATCATAGATGGCACAACCAACATCATCTTCATTCCTCCATAGATGGACTTATGATGTGTTTCTAAGTTTT AGAGGTGAGGATACCAGAAATGGTTTCACTGGAAATCTTTATAACACTTTGAGTCAAAGGGGAATTCACACATTCATAGATGATGAAGGCCTTAGGAGAG GTGAAGAGATTACCCCAACACTTCTAAAGGCTATTGAAGAATCTAGGATTGCAATTGTCATATTCTCTGAAAGTTATGCATCTTCAAGGTTTTGTCTTAC AGAACTTGCTAAGATCATTGAGTGTGTAAATGGCAAGGGAAGATTACTTTTACCCGTTTTCTATGGCGTCGATCCATCAGAAGTGAGACATCAAAGAGGG AGCTATGGAGAAGCATTAGATGAGCATGAAAAGAGGCAAAATGTGGAAGAATGGAGACTGGCTTTGCATAAGGCAGCAAACTTGTCTGGTTGGCATTTCA AACAAGGATATGAATATGTGTTTATTGGAAATATTGTTGATGAAGTCTCGAAAAAGCTTAATCGTGTTCCTTTACATATTACTGATTACCTTGTTGGGAT GGAGCCTCGGATACGAGAAGTAAACAAACTTCTTAGAGTTGGGTTTGATGATGACCAAGTGAAGATGGTAGGGATTTGTGGGATTGGTGGAATAGGTAAA ACAACAATTGCATATGCTGTATATAACTCAATTGCCGATCAGTTTGAAGCTTTATGCTTTCTCTCCAATATTAGAGAAAAATCAAATAAGAATGGTCTGG TATCACTCCAAGAGACACTACTACTAGAAATGGTTGGGGAGGATATTAAGTTGGGAGATGTGAGTCAAGGAATTCCAATTATAAAAAGGAGGCTTAATCA AAAGAAAGTGTTATTGGTTCTCGACGATGTTGACAAATTGCAGCAATTACAAGCATTAGCTGGAAGGAGTGATTGGCTTGGTTCTGGTAGTAGAGTCATT ATAACCACAAGGGATAAGCATTTATTACTTGAACATGGAGTTGCAAAATTATATGATGTGAAAGAATTAAATAGGGAGAAATCTTTTGAATTGTTTACTT GGCATGCCTTTAAAAGTAATAAAAATGATCCAAGTTATGTGAACATGTCAAATCGCGCAATTCGTTATGCCAATGGCCTTCCATTGGCTTTGTGTATAAT TGGTTCTAACTTGTTTGGTGAAGGCCTAGAAGAATGGGATTCAACATTAGATAACTATGAATCTGGGACAAATAAAAGTGTTCAAGAAATACTTAAAGTA AGCTATGACAGTTTGGAAGATAATGAGAAAGGAATTTTCCTTGACATTGCTTGTTTCTTCCAAGGTCAGAGAATAGAGTGTGTCATCGACATGTTGCTAC ATGGTCGTGGCTTTCGACCAGAGTACAGTATCAAAGTTTTGATGCATAAATCTCTCTTAAGGGTTAAATGTGGTCATGTAAGTATGCATGATTTAATAGA GGAAATGGGAAAAGAAATTGTGAGGACAGAATCACCAGTAGAGCCCGGCTACCGCAGTAGGTTATGGTTTTATGAAGACATTATTCATGTTTTAGAAGAA GACATGGTATGTGACAACATATGTAGGAAGATATTTTTCATATGAAATTGGTTTTTCGCATGTTTCTTAGATCTACCTTCTACAGTTTGTCTTAAAAAAA TACATTAACAATAGGACAACATGATTTTCAAATTTCTAACTGAAATGTAACATATATTTTGTGTTCAATTGTAAGGGAACTGAAAAAATCGAAGTCATGA TGTTGGATTTGCCTGAAGATGAAGAAGTATGCTGGACAGGGGAGGAATTCAAGAAGATGAAAAACCTCAAAATACTTAAGGTTATAAATGCAAACTTCTC CACGGGCCCCAAATATCTCCCAAACAGTTTAAGAGTGCTTGATTGGAGGGGATATCCATGGCCATATTTACCCTCTGATTTTCGGCCAAGGAAACTCAAC ATACTCAACTTGCCTAATAGTAGTCTTGTATTGAACGCTCCCTTAAAGAGTTTTAAGAGTTTGAGTCACTTGAATTTTGAAGGATGTGAATCTTTAATAC AACTACCCGATGTATCTGGCGTCCCAAACCTAATAGAATTATGCCTCGATGATTGCACGAATTTGATTGAAGTTCATGATTCCATTGGATTTCTTCCTAA ACTCAGAAAGTTGAGTGTTCAAGGATGCACTAGGCTTAGCAAATTTGCATGCAGTATCAACTTGACATATCTTGAAACTCTCTCTTTGTATGGTTGCTCA AGTCTTAAAAAATTTCCAAAAGTTTTAGGAAAGATGGAGTATCTAGAAGATGTTGATTTAGGATCCACTTCAATAGAAGAATTGCCATATTCAATACAAA ATCTAATTGGTCTTAGAAGATTGGACTTGATCAATTGTAAAGGGTTGATTCAACTGCCAAGTAGCATTTTCATGTTACCAAAACTTGAGTCATTGGAAGC TGAATCATGTAGCGGGTGCCAAATATTAAACAATGATTGTGAAGAAGAAGAAAGTGTGAGCTTAATAGACTCCTCAAAAGTGAAAGATCTTCACTTCAGA GCATGCAATTTGACAGATGAATTTCTTCTTATTTATCTCACTTACTTTCCCAACATAGAAATGTTACACCTAGGCAATAATAATATCACAATACTTCCTT CATGTATTGAAAAGTGTCTCTATTTGGAAAGCCTCTATGTGGATGACTGCAACAAGCTTCAACAAATTATGGCACTTCCACCAAACATTAAAAATTTCTC AGCAAGGAATTGCATATCCTTGACTTCAGATGCAACAAGCTTATTATTGAGTCAGGTGCTTCACTTTTTCTTAGCTTCTCATGATTATAATTAAGATATT CTTGTATTAGTGTAGCTTAAATAGTGTGTAACCTAAGCACAAGCAATGACTAAAATGCATGACATGTAAATATATCCAACACGCCCCTTAGTAAAATTTC ATTGTTCTTGCCTTGCATGAAATGTTGACATTTCTCAATGTTTTAATCAATTTTTAAGCCATTGAAACTTTGGGAAATGATGAAGCAAAAATTTATTTTC CTAATTGCATCAATTGGTTTCTCTCAGCATAGAAGTTAACTTTGCACAACTAAATTCATGAGTTCTGATAAATATTTGATTTATAGGAAATACACGAGGC ACGAAGCACGCATTTTATTTTTCCAGGAACAAAAGTTCCAGATTGGTTTGACCATTGCAACAAGGGATCATCAATATCTTTCTGGTTTCGTAACAAATTC CCAGCAATTGCTATGTGTTTTGTTTTCGGATGTTTAGACAAAGAGCCAAGACATTTGAGGTCCAAGTTCCATGTGTTCATTAATGGCAAGCCACCATTCT ATTCTAATGATAGTGATAGTTTCATAATGCTGAGAGATCATACATATATCTTCGATCTACAACGAGTAGTGGAACTTCCTACGCATCAACTTGATCAGGT AATTTTCGAAGACGAGTGGAATCGTGTGGAGATTCATTGTTTGGATAGTCGAAACGTTTTAAAATCGTCGATAGGTAATGCTGTTGTTAAATGGAGTGGT GTGTATGTGTATAAGGATGGGAATAACATGGATGATGTTTGGTTTCTTAGTACTAATCCTCAAAACAAAACTTATGTTGATTTGGTGGAACGTTACCCGT GGATCAAGAAACAACATAACAATGGTAAGAATCAAGATACAATTTTTCTTTTGGATTGATGAAAATGGATGGGATGAAGTGTAATGTAATGGTACTAGGA TTACTTGTTTGAATTGATCAAATAGGATGAAATGGATTGAAACTATATCATTCAATATCTCTATATTTATTCTATGTTAATTTGGACAACGATCTGATGT CTCAAAGTCTGTTCGAAACTAATAACAACATGTCACATTAATAAATAAAAAATTAAATATTCATATTTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_140613; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_276768
| Blastp | TMV resistance protein N from Nicotiana with 41.71% of identity |
|---|---|
| Blastx | TMV resistance protein N from Nicotiana with 40.38% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | mtr-MIR2609b (MI0011863) |
| Ncbi protein | Link to NCBI protein (XP_020991468.1) |
| Pfam | TIR domain (PF01582.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |