Ll_transcript_276771

• Id Trinity: TRINITY_DN45755_c0_g1_i8
• Name Transcript: Ll_transcript_276771
• Sequence: GGACTACTTGCTTCCACAGAAATTTCATCAATCTATGTCCCTACCAACTTTACCAAATGCATAATAATGAAAAACGCAGACCATAATTATGTAGCTATGA AGCGAATTTTATAATATAACTTGGCCATCAAAGACTTTTATCTAAATCTCTTGCTTCTTGGAGTCATTTTCTTTATTCAAGGTGCTTAGATCTCTATAGA GTTTCTAGAATCAAGAAAGATTGTTCCAACATCATAGATGGCACAACCAACATCATCTTCATTCCTCCATAGATGGACTTATGATGTGTTTCTAAGTTTT AGAGGTGAGGATACCAGAAATGGTTTCACTGGAAATCTTTATAACACTTTGAGTCAAAGGGGAATTCACACATTCATAGATGATGAAGGCCTTAGGAGAG GTGAAGAGATTACCCCAACACTTCTAAAGGCTATTGAAGAATCTAGGATTGCAATTGTCATATTCTCTGAAAGTTATGCATCTTCAAGGTTTTGTCTTAC AGAACTTGCTAAGATCATTGAGTGTGTAAATGGCAAGGGAAGATTACTTTTACCCGTTTTCTATGGCGTCGATCCATCAGAAGTGAGACATCAAAGAGGG AGCTATGGAGAAGCATTAGATGAGCATGAAAAGAGGCAAAATGTGGAAGAATGGAGACTGGCTTTGCATAAGGCAGCAAACTTGTCTGGTTGGCATTTCA AACAAGGATATGAATATGTGTTTATTGGAAATATTGTTGATGAAGTCTCGAAAAAGCTTAATCGTGTTCCTTTACATATTACTGATTACCTTGTTGGGAT GGAGCCTCGGATACGAGAAGTAAACAAACTTCTTAGAGTTGGGTTTGATGATGACCAAGTGAAGATGGTAGGGATTTGTGGGATTGGTGGAATAGGTAAA ACAACAATTGCATATGCTGTATATAACTCAATTGCCGATCAGTTTGAAGCTTTATGCTTTCTCTCCAATATTAGAGAAAAATCAAATAAGAATGGTCTGG TATCACTCCAAGAGACACTACTACTAGAAATGGTTGGGGAGGATATTAAGTTGGGAGATGTGAGTCAAGGAATTCCAATTATAAAAAGGAGGCTTAATCA AAAGAAAGTGTTATTGGTTCTCGACGATGTTGACAAATTGCAGCAATTACAAGCATTAGCTGGAAGGAGTGATTGGCTTGGTTCTGGTAGTAGAGTCATT ATAACCACAAGGGATAAGCATTTATTACTTGAACATGGAGTTGCAAAATTATATGATGTGAAAGAATTAAATAGGGAGAAATCTTTTGAATTGTTTACTT GGCATGCCTTTAAAAGTAATAAAAATGATCCAAGTTATGTGAACATGTCAAATCGCGCAATTCGTTATGCCAATGGCCTTCCATTGGCTTTGTGTATAAT TGGTTCTAACTTGTTTGGTGAAGGCCTAGAAGAATGGGATTCAACATTAGATAACTATGAATCTGGGACAAATAAAAGTGTTCAAGAAATACTTAAAGTA AGCTATGACAGTTTGGAAGATAATGAGAAAGGAATTTTCCTTGACATTGCTTGTTTCTTCCAAGGTCAGAGAATAGAGTGTGTCATCGACATGTTGCTAC ATGGTCGTGGCTTTCGACCAGAGTACAGTATCAAAGTTTTGATGCATAAATCTCTCTTAAGGGTTAAATGTGGTCATGTAAGTATGCATGATTTAATAGA GGAAATGGGAAAAGAAATTGTGAGGACAGAATCACCAGTAGAGCCCGGCTACCGCAGTAGGTTATGGTTTTATGAAGACATTATTCATGTTTTAGAAGAA GACATGGGAACTGAAAAAATCGAAGTCATGATGTTGGATTTGCCTGAAGATGAAGAAGTATGCTGGACAGGGGAGGAATTCAAGAAGATGAAAAACCTCA AAATACTTAAGGTTATAAATGCAAACTTCTCCACGGGCCCCAAATATCTCCCAAACAGTTTAAGAGTGCTTGATTGGAGGGGATATCCATGGCCATATTT ACCCTCTGATTTTCGGCCAAGGAAACTCAACATACTCAACTTGCCTAATAGTAGTCTTGTATTGAACGCTCCCTTAAAGAGTTTTAAGAGTTTGAGTCAC TTGAATTTTGAAGGATGTGAATCTTTAATACAACTACCCGATGTATCTGGCGTCCCAAACCTAATAGAATTATGCCTCGATGATTGCACGAATTTGATTG AAGTTCATGATTCCATTGGATTTCTTCCTAAACTCAGAAAGTTGAGTGTTCAAGGATGCACTAGGCTTAGCAAATTTGCATGCAGTATCAACTTGACATA TCTTGAAACTCTCTCTTTGTATGGTTGCTCAAGTCTTAAAAAATTTCCAAAAGTTTTAGGAAAGATGGAGTATCTAGAAGATGTTGATTTAGGATCCACT TCAATAGAAGAATTGCCATATTCAATACAAAATCTAATTGGTCTTAGAAGATTGGACTTGATCAATTGTAAAGGGTTGATTCAACTGCCAAGTAGCATTT TCATGTTACCAAAACTTGAGTCATTGGAAGCTGAATCATGTAGCGGGTGCCAAATATTAAACAATGATTGTGAAGAAGAAGAAAGTGTGAGCTTAATAGA CTCCTCAAAAGTGAAAGATCTTCACTTCAGAGCATGCAATTTGACAGATGAATTTCTTCTTATTTATCTCACTTACTTTCCCAACATAGAAATGTTACAC CTAGGCAATAATAATATCACAATACTTCCTTCATGTATTGAAAAGTGTCTCTATTTGGAAAGCCTCTATGTGGATGACTGCAACAAGCTTCAACAAATTA TGGCACTTCCACCAAACATTAAAAATTTCTCAGCAAGGAATTGCATATCCTTGACTTCAGATGCAACAAGCTTATTATTGAGTCAGGTGCTTCACTTTTT CTTAGCTTCTCATGATTATAATTAAGATATTCTTGTATTAGTGTAGCTTAAATAGTGTGTAACCTAAGCACAAGCAATGACTAAAATGCATGACATGTAA ATATATCCAACACGCCCCTTAGTAAAATTTCATTGTTCTTGCCTTGCATGAAATGTTGACATTTCTCAATGTTTTAATCAATTTTTAAGCCATTGAAACT TTGGGAAATGATGAAGCAAAAATTTATTTTCCTAATTGCATCAATTGGTTTCTCTCAGCATAGAAGTTAACTTTGCACAACTAAATTCATGAGTTCTGAT AAATATTTGATTTATAGGAAATACACGAGGCACGAAGCACGCATTTTATTTTTCCAGGAACAAAAGTTCCAGATTGGTTTGACCATTGCAACAAGGGATC ATCAATATCTTTCTGGTTTCGTAACAAATTCCCAGCAATTGCTATGTGTTTTGTTTTCGGATGTTTAGACAAAGAGCCAAGACATTTGAGGTCCAAGTTC CATGTGTTCATTAATGGCAAGCCACCATTCTATTCTAATGATAGTGATAGTTTCATAATGCTGAGAGATCATACATATATCTTCGATCTACAACGAGTAG TGGAACTTCCTACGCATCAACTTGATCAGGTAATTTTCGAAGACGAGTGGAATCGTGTGGAGATTCATTGTTTGGATAGTCGAAACGTTTTAAAATCGTC GATAGGTAATGCTGTTGTTAAATGGAGTGGTGTGTATGTGTATAAGGATGGGAATAACATGGATGATGTTTGGTTTCTTAGTACTAATCCTCAAAACAAA ACTTATGTTGATTTGGTGGAACGTTACCCGTGGATCAAGAAACAACATAACAATGGTAAGAATCAAGATACAATTTTTCTTTTGGATTGATGAAAATGGA TGGGATGAAGTGTAATGTAATGGTACTAGGATTACTTGTTTGAATTGATCAAATAGGATGAAATGGATTGAAACTATATCATTCAATATCTCTATATTTA TTCTATGTTAATTTGGACAACGATCTGATGTCTCAAAGTCTGTTCGAAACTAATAACAACATGTCACATTAATAAATAAAAAATTAAATATTCATATTTT T
• Tissue: pods
• Gene name: LI_gene_140613;
• Additional information: details;

Expression of Ll_transcript_276771

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.1
• PS2: 0
• PS3: 0.1
• PW1: 0.3
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_276771

• Blastp: TMV resistance protein N from Nicotiana with 36.82% of identity
• Blastx: TMV resistance protein N from Nicotiana with 36.6% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: mtr-MIR2609b (MI0011863)
• Ncbi protein: Link to NCBI protein (XP_020991468.1)
• Pfam: TIR domain (PF01582.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;