Ll_transcript_276890

• Id Trinity: TRINITY_DN45763_c2_g2_i1
• Name Transcript: Ll_transcript_276890
• Sequence: TTATGATAATTATTTGTTTTTGAAATTGTGGTTTAGTATAAATGTGTATTTTGAAAGAAAAACGGGCCAGCATCTGCCAAATATAGGACGAACTGACATT TTGGGCTCTTTTAGTATAAGGGCCGGGTCAGACCAAACCATATTCTTTGACGGGACAAAGACGGGTCGGGCCGGCCCATATTGCCACCCGTAGTATTTAT ACAGCATAGATGAATAAAATGTTGGTTTGATTTGACATAACTATATAAGGCATGGGGTAGAATTTGTGAAAGAAAATACACAAATATGTTTTGTGATTGG ACGGAAAGAAGCAGCAGAAAAATTGGGATTAGGGAAACAGAAATCAAACAATAATCGCGTCACCATGTCGGAAGCATCCGAAACGTCGTCGTATTGGTGC TACCACTGCGAGAAACGCGTCTCCACCGAAACCCTCCCCAACCTCTCCGATCTCATTTGCGCCGACTGCAAAAACGGCTTCGTTGAACAAATTCCTCTCC TTACTCCTTCTCCATCCCCTCCTTCTTCCGATTCAGATCATTCTCACTTTGCTTCCAATTTTCTCCACGTTCTTCGCCTCATTGCTCAATCCGCGCGTGA TCACGACGCTCCCCCTCCTCCTCCTCCTCCTCCTTCTCGCTCTCCTGGCAGCGATTTCCTCAGGATCGAGCTAGGTGGCTGGAACGATGATGAAGAAGGC GATGATGATAACGATGATGGAGAAGAAGAAGAAGAACAAGAAGAAGAACAAGAAGAAGAAGAAGAAGAGCTGGATCGAAACAGCAATATGGATCTTCCTG GAGATGATGAAGATCTGAGGAGGAGTAGGAGGAGGCGAGAGGTTCTTCGTCTTCGAATTAGGGATTTGGCGATGCGAACAAGGAGCATGAGGAATCGGAT ATTGGATTGGTCTGATATTCTGTCTGGTCTGGATGATAATTCGATTCAGTTTCGTCTTCAGGTACCGGAGTCTGATCGATACGTCGGGAATCCGGAGGAT TACGTCGACGCGGCTGAGTACGAGGCGTTGCTGCAGACACTGGCGGAGACAGATGGTGGTGGGAAGAAGGGAGCACCTCCGGCTGCGAAGTCCGCGGTGG AGGCGTTGCCGACGGTGGAGATCGTGTCGGAGAAGGAGGTTGTGGCGTGTGCTATCTGTAAGGATATGGTTGGTGTTGGTGATGTGGCGAAGAGATTGCC GTGTGGGCATCAATACCATGGAGATTGCATTGTTCCTTGGTTGGGTTCAAGAAATTCATGCCCTATTTGTAGGTTTGAGCTTCCAACTGATGATAAGGAA TATGAACAACAGAGGAAGAATAAGAAGGTGATGAATAGTTCTTCAAATGGAGCTTCCGGTTCGGGTGGTGGATCGGGTTGATTTCGTTCAATCTGGTATG TTATGTTCAGTTCTGCTGTGCCATTTGTGTAATATAATTTGGTGCTTTTTATCTTCTGTCAACTTTTTTTATTCCCCTTTTTGTAACAAAGGTTGCATAA TGTTATTTATATGAAGCTTCATGGAGTTGAATTCTTAGCTGATGCTCTCAGATCAATGTATATAGTCTCTTGTATAACACTACTTCAACAGAATTTGCAT TTTTTTGAATAATTTTATGCCTGTCCTTTTGTTGTGGTCATTTTTTGTTGCTGGATTTGTGGTATAATCCCATGGATTAAACACTGGTTTAGTGAAATTG ATCTTGGTCGATTTTGTCTCTCTTCGGATTAGTTATCGTTGGACTTGTGGCAAGTAGCCTCGGAAAGTTATCTGTAGTAACAAGCTCTATATACTTGTGT GAAATGACAAATAGTTTTGAAGTTACTAGTTAGCAAAATCTGAAGAAAGATCAAGTATTAGAGAGAGTGCATTTACATAGATATCTTGATGGATCTCTCA CTACAGAAAGCAACTTTATCGGTAGATATGAACCGGATGTGGTTGATAAGTAGCACTGCAATGCTTTCAGCAGCTTCTTTTCATGATTAACACTAAACAG TTGCACAAAAACTTTCCTTACTCCACCAACTTGAAGAATTCTGGCTCCCAAGCGGAATTTCCCTTTCACTTATCTGTTATCTTTGTCCCCAATCTCACTG CATATCACAGTAGCAGTTTCAAGCCATCAGGACAAAACATGATTCTATTTTCAAATCATGACAAACTAGGCATCATACATAGTCATACAGAGCATACTCT GCATCTTGCAACTAAGCAAATGAAATATCAGCCTCTCAAGATTAAGTACCCCGTTCTCGGAATCCATGTGCAACATTGTCAGCTTTTCTCCCAAACTTAG TCATTCTAGTCTGAACTGATTGATGATTTTGAGAAGTATCAGGTACCATGGATGTGGAGGAACTTCTTGTATACCAACTAGCTTATGAGAAGTATTCAAG ATATCTTCTCACTTTGGTTGATGAGCCCTTATAAACCACAGGTATATATATGGTTAAAAGGGAACATGGTGATTATTTAATCTTTGTAGGATGAGTAAGC TATGGATCATCATGACCAAAGGAAACATATAAGCAACCATTTAATGTTTTATGGAAAAGGATCATAATTCATAACAGATGTTCCTTTTGCATCTCTTCTG TTTTGTGCCTTGAAAGGGAAAACAAATTTGAAGGGGAAATGATATAATACTTTATAGTATATAGTAGTGATTTCCATTCCTTTGGACAGCTACAGAAATT TTCAAGATTGATCATTTCAGAAAAAATAGTGATGATACATGTATATTGTGACCCAAAACTATTTAGTGAGGGTTGAACACAAACTTTCAGAAAAATATTT GTTAAGGACCCTATAACTATAAAGACTTTGCTGGGTACAGGATTTAACTTCCATGGTTACGAATATGATAAGGGTCTAAGGGTGTTAGGGTATCATAATT CTTCATCCCACTGTTTCACCAGTTATTTTACATGATT
• Tissue: pods
• Gene name: LI_gene_140644;
• Additional information: details;

Expression of Ll_transcript_276890

FPKM

• PAB: 10.1
• PNAB: 4.1
• PS1: 5.6
• PS2: 3.6
• PS3: 5.5
• PW1: 5.2
• PW2: 6.1
• PW3: 5.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_276890

• Blastp: E3 ubiquitin-protein ligase CIP8 from Arabidopsis with 46.95% of identity
• Blastx: E3 ubiquitin-protein ligase CIP8 from Arabidopsis with 63.46% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT5G64920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452604.1)
• Pfam: zinc-ribbon (PF14369.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;