Ll_transcript_276331

• Id Trinity: TRINITY_DN45766_c1_g1_i2
• Name Transcript: Ll_transcript_276331
• Sequence: CTAATATTTTCTATTAGTAAGCCCAAAAAGCCCAAACGCAACGTTTTATACCTTTATTGCCATTTTCATTCACTATCACTGTCTTTCTTTCCCAGTGTGA GAAAATCCCTAAACTCAACAACCCTCTTCAGTTCTTCAAAGCGAATCAAGCTTCAATCTTTTGTAATAATGAAGGTAGTAGCACTTGTTAGCGGTGGCAA AGATAGCTGCTATGCAATGATGAAGTGTATTCAATATGGCCACCAGATTGTTGCATTGGCGAATTTGTTGCCAGTTGATGATTCTGTGGACGAGCTCGAT AGCTATATGTACCAAACTGTTGGGCATCAAATTATTGTCAGCTATGCTGAATGCATGGGATTGCCATTGTTCAGGAGGCGAATACAAGGATCCACAAGGC ATCAAGAGCTTGGTTACAAAATAACTCAAGGTGATGAGGTTGAAGATATGTTTAATTTGTTATGTGAAGTGAAAAGACAGATTCCCTCGGTTAATGCGGT ATCATCTGGAGCCATTGCGTCTGACTATCAGAGATTGCGGGTGGAAAGTGTTTGTTCAAGGTTAGGCTTTGTTTCTCTGGCATACTTATGGAGACAAGAT CAGTCATTGCTCCTCCAGGAAATGATTGCAAATGGAATTGTGGCTATAACTGTAAAGGTAGCAGCCATGGGTTTGGATCCTGCAAAGCATTTGGGTAAAG AATTAGCCTTCTTAAATGCTTATTTGCATAAGTTGAAAGAGTTATATGGAATTAATGTTTGTGGTGAAGGAGGAGAATATGAAACATTAACTCTTGATTG CCCTCTATTTACTGTAAGTTCATACCGTCATTGCTGTGGTTAAATGAAAATTCTGGACTTCTTGTCATTGAGGCTGGTATTGATTTATTTATTTATACTC TGTGTGGTTCACTAACCACTGAATTTGCCATTGTCCATATGATCTTAGTTGTTGTGTATAAGTTTGGTTGTAAAATGCTTGTCTGTTTTGATGCCAGTTT TGTGATACTGATCCGAATGATTTTGAGAACTCAATCTTGTAAATTGGTTTCTTGCCACACTTCAAATTTATAATCAATATTTTTCTTCTATTTTCTTCTG TTGCATATGTTACTTCAAATTTCCAGAATGCTCGCATTGTGCTTGATGAATATGAAGTCGTGAGGCACTCTTCAGATTCCATAGCCCCGGTTGGAGTCCT TCATCCCTTAGCATTTCATTTGGAAAATAAGGCAGACATCCAGTCTTTAAAATCACAAGACAAAATAAATGAGGTCGGCACACATAAACCGGGATCTGTG ATTGAAGTAATCGATAATCTAGAAAATTTTGATGCCACATGCAAGCCTGTGGATTATAGTGTTGATTCAATTGATGGCTTAGAGCATAAATTTATCATTT CAAGAACAAATAACAGGAGGACATTTTCCTTATGCTGCTGGTTGCAAGATTCATGCAATGGTTTGCAGAAAGATTTGAAGACTGTTTTGGAGAAAGTCGA GTCACAATTAGCGTCCTTTGGTTTTGGTTGGGAGAATGTTATTTATATTCACCTTTACATTGATGACATGAACAAGTTCTCAGAGGCAAATGAGACATAT GTGAGGTTTATAACACAGGAGAAGTGCCCATTTGGTGTCCCATCCCGTAGTACAGTTGAAATGCCTCTAGTAGAAATGGGTTTAAGCAGAGCATACATTG AAGTTCTGATAGCAAACAATAAAGATAAAAAGGTTTTGCATGTGCAGAGTATTTCCTCTTGGGCACCTAGTTGCATTGGGCCATACAGCCAGGCAACCTT GCACGAGGGTATACTTCACATGGCTGGTCAGTTGGGGCTGGACCCTCCTACAATGAATCTTTGCAATGGAGGCCCTACTGTTGAACTGGAACAAGCACTA AGAAACAGTGAAGCAGTGGCAAAGTGCTTTAATTGTTCAATATCAACATCTTCAATTGCTTTTATTGTTTACTGTTCTAAACATGTCTCATCTTTGGAGA GACTTGATATCCAGGAGAAACAAGAAACAATTTTTAGGCAGAAGAAGATCTCCATTTCACGGGAAAGGCACACGGACAAAGTATTATTAGATCCGATGTT CCTTTATGTCCTTGTTCCTGATCTTCCTAAAAGAGCATACGTAGAAGTAAAGCCTATTCTTTATGTCGAGGATGACACAGATGTAGCAATTGAGACAAAC ACAGAAAGATCTTGTTCAAAGGAACCACATTATTGGGGTTTCAAGCAGGAAGATTGGCATGATTCTTGCATTCAGAAATGTGTGGTTCCAGGAAAGATAT GTGCCAGTATAGTGTCTATTACAAGGGAGTTGGCTGCAAAGATATGTTTTGATTCCCCTCGTCCTGATTATGTAAATGATGGTCAATACTCTCTACCTAA GGTGCATATGGAGAAGTTATCGAAGTTCTGCGTCTATCTTCTCGACAAAATTATAAGTGATCACGACTTTTCCTGGGAAGATATAATGAATTTGCGGTTC TACATCCCGGCAAGCCTTCAACTGACGGTGGAGGAATTGATGCCTATGTTCAGCAATGCACTTCTGGAGCTTGCTGAGATGAGTCAAAAGAAAGTTATGA ATGGTGAGGAGCCAATCTTCAACATAGTTCCTGTCTTAGGTGCTGGGAGGGCTGCTTCATCCATGGATGATGTTGTAACCTGCGAATTACTGGCCCGGAA ATCCTGATTATATGCGCTTTATGAACAAACTGGGGTGATTAAGGGGCTCAAGGATAGTTCAGTTGCTGTGTGGTTTTGCAGCTGATGTTAGTTTTTTGTT TTAATGGCAAATGTCATTGCCTTTTCAATTTGTCTATCTTATGGATCAATTATATTTATTTATTAATCGAAGTTACTATTGGTTGATAGAGAATATAAGT AGACATTTGACGGTGCAATCAATACCTTTGCCCTTTATATACATGTTAGAATATTCACAAGATATTTGTGGGAGAGAGTGCTTCATAATAGATTTGAATA AATTGTTATTGTTTTTTGTTAAAAAAAAAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_140671;
• Additional information: details;

Expression of Ll_transcript_276331

FPKM

• PAB: 0.1
• PNAB: 0.3
• PS1: 0.3
• PS2: 0.6
• PS3: 0.6
• PW1: 0.7
• PW2: 0.6
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_276331

• Blastp: Diphthine--ammonia ligase from Schizosaccharomyces with 33.08% of identity
• Blastx: Diphthine--ammonia ligase from Danio with 62.33% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SPBC577.12)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421815.1)
• Pfam: Endoribonuclease L-PSP (PF01042.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;