| Id Trinity | TRINITY_DN45771_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_277357 |
| Sequence | GTCCTTTTGAGTTTCCTAGGATTTCCAAACCCCTTGCATTTTGCTGCATAGGAACTAACCCACCTGCGACTATGGCTGGTTTGCAACGCCGTCGTCGTCA ATGCCCTTTGTTTGCTGAGATGGGCCCTGTTTACATCTTCAAGGAACCAATTGGTCTAGAAAAGATGTCTCGCTTGGCTTCTAGAGGAGGGGATATAGTG CCTTCTTTCGGTAATGCAGCAGGGATACCATGGCTTGCAACAAATTCCCACGTGCAGAGCAAAGCAGAGGAAAGTGTTCTTTTGGATGCAGAAATTGCAG GTTTCATTCACCTGCTCTATCATCCTAGTTTGCTCAGTGGGCGTTTCTGTCCAGACGCTTCTCCTTCTGGTGCTGCAGGAATGCTTCGGCGTCCAGCTGA GGTTCTTGGGCAAGTCCACGTTGCTACACGAATGCGACCTGTGGATACGTTGTGGGCATTGGCTTATGGTGGTCCATTGTCTTTGCTTCCCTTGGCAATA AGCAGTGTACATGAGGAAACTCTGGAACCACAACAAGGGAATTTTTCTGTGGCTGCAGCCACCACATGTCTTGCTGCTTCAATATTTCGAATAATATCTG TGGCGATTCAACATCCAAGGAACAATGAGGATCTGTCTCATGGAAAAGGTCCTGAGATTCTTTCAAAAATTTTGAATTATCTTCTCCAAACTCTATCATC GCTTGATATTGGAAAGCATGATGGTGTAAGGGATGAGGAACTTGTTGCAGCAATTGTCTCGCTTTGTCAATCTCAGAAGATCAATCATATGCTTAAAGTG CAGCTCTTCACTACACTGCTGTTAGATTTAAAAATTTGGAGTTTATGTAGTTATGGAATACAAAAGAAGCTTCTATCATCACTTGCTGACATGGTTTTCA CTGAGTCGACAGTAATGCGAGATGCTAATGCTATTCAGATGCTTATTGATGGCTGCAGAAGATGCTATTGGACTGTTCCTGAAAAGGATTCAGTAAATAC TTTTTCTCTAACTGGGGCAACAAGACCAGTGGGTGAAGTCAATGCTTTAGTTGATGAGCTCTTAGTGGTAATTGAACTTCTAATAGTGGCAGCATCTCCA TTGGTTGCCTCAGATGATGTTCGATGTTTACTTGGCTTCATGGTTGACTGTCCACAACCCAATCAGATTGCTAGGACATTGCATCTCTTCTACAGGTTGG TAGTGCAGCCAAATACAGCCAGAGCTCACACACTTGCAGAAGCATTCCTTGCATGTGGTGGGATAGAAACTCTTCTTGTTCTTCTCCAAAGGGAAGCTAA AGCTGGAGATAATGATGTCATGGAATCAATGTCAAAGTGTTCTGAACTTAAAAAAACTGAGATTGATGGTAGCAGTGAAATCTGTCAGGATGATGGAGGG TCAGAGGAGAAAAGTGAAGCCATCTTACAAGACAATGACCAAGGTTCTCAATCTGTTGATTGTGAGAGTAACTGTGATCTTAGTTCTCCTTCTGTGAATA GGATGTCATTTACCTCCGAAACTCCACCTGTCAAGAATTTGGGAGGCATAAGTCTAAACATTAGTGCTGACAGTGCTAGAAAAAATGTTTACAATGTTGA TAAAAGTGATGGCATTGTTGTTGGGATCATAGGTCTCTTAGGTGCTTTAGTAGCTTCTGGGCATCTGAGGTTTGGTTCCCGTGATGGTCCTGATACGACA AGCAACCTTTTGGGTGTTGGACTGCACGACGGAGGTGGTACAATGTTTGATGATAAGGTTTCTCTTCTTCTTTATGCTTTACAGAAGGCTTTCCAAGCAG CACCGAACAGGCTAATGACTAATAATGTTTACACAGCTCTGTTGGCTGCCTCGGTATGACATACTCCCTTCACCTTACCCCCTACTCCATACCATTGGAA ACAAGACATATTAGTGGCAGTTATTCTTATACCATTAGAAAAATATCAAGTGACTTTTCCTTGTATACTTATTATACAATGAAATTGCTATATCTAATGT CAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_140694; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_277357
| Blastp | BEACH domain-containing protein C2 from Arabidopsis with 58.15% of identity |
|---|---|
| Blastx | BEACH domain-containing protein C2 from Arabidopsis with 59.38% of identity |
| Eggnog | beige BEACH domain containing protein(ENOG410XNQC) |
| Kegg | Link to kegg annotations (AT2G45540) |
| CantataDB | Link to cantataDB annotations (CNT0001256) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431479.1) |
| Pfam | Domain of unknown function (DUF4704) (PF15787.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |