Ll_transcript_277079

• Id Trinity: TRINITY_DN45772_c0_g1_i1
• Name Transcript: Ll_transcript_277079
• Sequence: TCCATTCCATTCCATTCCATTCTATTCCATTCCATTCCATTCCATTCTCTCTATTTTCCGTGTTTGGTCAACTCAACCCTCTCGAAGAAGAAGAAGAAGA GGAAGAGAATGGGAACTCCTGAATTTCCAGATTTAGGGAAACATTGTTCTCTTCCTCATTGCAAACTCATCGATTTCTTACCCTTCACTTGCGATCGCTG CAACCAAGTAACTTCTCTCTCTCTTTTCCTTTTTATTATTAGCTTTTTCTTTCCATCATTCTCATCTATAATCACATTCAAATTCTTCACAAACACCGTG TCAAAATCATTTTCAATTATTATTATATTATCATTTTCTACGGATCTAACTACATTCTTTTTATTTACACCGATTTCATTTCTTATAATGTGGATCAATT TCAACTGAAATTAAGATAGTTATCTATTGCATCATAAATATGTAACAATTGATGCTGTTAGATTGAAAGTTCAAATTCCGCTATGATTTAGCTTCTCTAG GTGCATTTATCGTGTACCGAAACCTGCCTAGGGTTCGATCCAGTTCGTGCGAGTTATACTTTCAGAAACTGTTTTTGTGTTCACAAATTCGGTTGATATA AGCATGCGGTATTTGGCTTATGATTTTAACATTGGGTTGTATATTAGTCAAACGAATTTCGTAGTTCTGATAAGTATTTTGACTTGTTAAGTTCACGAGG CTTCAAATATCGAGTAGCGATTATGTGTGGTGTCGTTTTGAGAATGTGCCGGGTTGATGGTATGGAATTATGGATTACTGTTCTCGTTGTGTTCAGTTTA AGAGCTCTTTGTTTGAGCTATAACTATGTCTTTACAATCTGTTGCAGGTATATTGTTTGGATCACCGAAGTTATACCAATCATCAGTGTACGAAAGGCAA CAAAGAAGATGTCACTGTTGTTATATGTCCTCTTTGTGCCAAAAGTGTTCGCCTGATTCCAGATCAAGATCCGAACATAACTTGGGAGCATCATGTTAAC ACTGACTGTGACCCATCGAATTTCGAGAAAGTCACAAAGAAGAAAAGATGCCCTGCCACAGGATGCAGAGAGTTTTTAGTATTCTCAAACACAATCAAGT GCAGGGACTGCATGGTAGACCATTGTCTGAAGCACCGGTTTGGACCTGATCACAAATGCCCTGGACCCAAAAAGTCGGAATCGAGCTTTTCTTTTACGAA TCCTTTTAATAGAAGTGCAAATGAGAAGTCAAAACCCAATTCAACCCCAGCCACATCTTCTAAATGGACTTCAAGTCTTCTTAACATGGCTTCTAGTATT CGAGCTTCAGCAGAACAAGCCTGGCAGACAGCAGTGGATGGGGTGGGACAGAGCAGTGGCAGTGGAAATAGAAATGATCAATTGGAGCAGTGCCCTCAGT GTGGTGCAAAGTTTTCATCAGTTACTACTTTGGTGGATCATGTGCAGAAGGTTCATGAAAGGAATGGAAACCGGTCTAAGGTAAACAAGATGCCTGTTGC AGCATGTCCTAAGTGTAGTAAAGGATTTGTAGACCCGGTGGCCCTTGTTGAGCACGTCGAAAGGGTTCACGGTGGTAGTTCTAGATAGCAGGCAAGGAGT TAAAACAGAGTTGAATTCTAAGTTGAAGATATTGCATTTTCTTGAATGGATTATTGAAGTTTATAAACTATTATTTTATAGCCAAAGGATGTGAATATGA ATTTGGAGATGTTAGATTTATACACAACAGTCGCGTAATTGTTGGTGACTTTGATTAATTCACCCATATTTCTTTATAGTATTGTTCCGTCATCCGTAGA TTCATGCCGATTGTTTGAATTGTCATTTTCAGTTTAGGATTAAGCTGTTTCGAGGCGGTGTGTCTAGCAAGACTTTCCAACTTGCCAGTACCGTGACCTT AATTCAAACAATGATGAAATCTTGTTTGTTGGCAAACCTTTGCTTGAATTATTTCATTTTCCTTTTAGAATAGAAACTTGGTTCCTTTAATTTCTGGTAC ATGTTAAATTGTAACACTTCCTTCACATGCAGACAGGTATAGTAAATAGCAGCATTGACTTATATGGTATAGCAGAACATTAAGCTATACCTATGACATG ATGTCCCG
• Tissue: pods
• Gene name: LI_gene_140696;
• Additional information: details;

Expression of Ll_transcript_277079

FPKM

• PAB: 0.7
• PNAB: 0.5
• PS1: 0.7
• PS2: 0.5
• PS3: 0.3
• PW1: 0.7
• PW2: 0.9
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_277079

• Blastp: Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 from Oryza sativa with 50.3% of identity
• Blastx: Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 from Oryza sativa with 57.09% of identity
• Eggnog: zinc finger(ENOG4111JCH)
• Kegg: Link to kegg annotations (4343653)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444080.1)
• Pfam: C2H2-type zinc finger (PF13894.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;