| Id Trinity | TRINITY_DN45780_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_276612 |
| Sequence | ATTAATTCTAGCAATTACTTTTTCAATAACATTTTCATCATACAGTATTGTATCATGTAGAGGAGCATAAATCTGAAATGTAATTTTGAAGTTTCAGGAA TTGGAGGATCAAAATTTATTTCAATACCCAATGGATTCTTTTGCATACCAACTCGATGATCTTGACTTCAATCCTTACACTGCATCCACAGAGAGCAACA ATTCCTCTCACAAACGCTTCAACTATGAAACCACACAAAGTGATTTCCCTATTCATAGTCCTGATCATTCTTTTGTTACACCAGCAAGACCCACCAAGCA ACTCAAATCTATGAGTACTGCTTGGAATGCTTCCAATTCCACTTCATCATCTCAACTCATTTCTTTTGAGCGCTCCAATGCTTCTTCTTCACTTGCTTCT CAGCAATATTACAACCTTCATACCAAGCCTAAGTTGGAGAGTATTGGGTGTAGTGAAAACTTGGATTTTGCTTATGAGGACAAAATAAAATTTCAAAATT ATGATAAACAAGCAAACAAGGCTAACACTGCGACGATTATGAGGAACACAACACAAGCTCAAGATCACGTATTAGCCGAAAGGAAGCGAAGGGAAAAGCT CAGCCAGAGGTTCATTGCTCTTTCAGCCATGGTTCCTGGACTCAAGAAGGTACTACATAATATTTGTGATTATTGATATATATGGTTATTGTGATTTATG CGGACACACACAATACTATACACTAAGAAATTCTTTTTCTCAAAGGAAATTCAAATCTATTAAATTAAATTTCGGATGCCCATGTATGTAAATATTCTTT ATTACATGTTGAATTAATTGATGGTTAATTCATGCATGTAGATGGACAAGGCTACTGTGTTGGGAGATGCTATAAAATATCTGAAACAACTACAAGAACG AGTGAAGATACTGGAAGAACAAGCAGCTGAAAAAACAATTGAATCAGCGGTATTTGTTAAGAGATCTATTCTCTTCGCAGATGATGATAATAGCTCCTCT TCTGATGAAAACTCCGACAAGCCAATCCCTGAAATAGAAGCTAGAGTTTGTGGTAAAGAGGTACTCATCAGAGTTCACTGTGACAAACATAATGGTCGAT CGGCTGCAATACTCAATGAGTTAGAGAAGTATCATCTCACTGTTCAGAGTAGCAGTATTTTGCCCTTTGGGAATAACACTCTTGACATAACCATTGTTGC TCAGGTAAATACCAGTAACTTCTGATTTTAAACAGTAACCATTGACTTTATCTTTTAAACTGTATTGTTAAGATATTTGGAAACGAAAAAGGAAAAACAG TAAAGTCTATTACTCCTTAGGTATTAATTGTATGTTTTTATCTCTACAAGTTTTTAGAAAAAACTCAAAGTAAAACTAAATGTTGTCACAATTTAATTGG GAAAATAACATTGTTGATTATTTTTACCATTTTTGAAGGCAAGATTTAAATTCCTTTATCAGTACTTTAACAAATGTCCTAATCTTTGACCTTAAAATAT TTTAAGAAGAGTTTAATTTTGGTACAATGTAAAAAACTCATACCGTAAGTTAATCATATTGCCAATTTTCTATATTTTTATATTTATCAACACGTGCTTG AAGAACAGTGATTAAAAAATAATGGACAACCTTGATTTGCGTTTTCTTGCAGATGAACAAGGAACACAGCGTGAAAGCAAAGGATCTCATAAAATGCTTG AGACAGTCTTTGAAGAAGTTAACTTGATCGTGAATAAATAATTCAAGGCATATCTCGTTGATGATGGGCATGACTAAAGAAATAATAAGCTTATTATTAA GTCTATTTTCCCTTTAAAAAAACTTAATTAGATTATATTGTTTTTTATTGCATGGCGCAATAATTATCTTTTTCATCCATGGTTTGTATTCTGAGTCATT TATCACTTGGGACTGCTCGATCTATATGCTGCTGAGTATGGACTTCAACAAGTAATTACTGCAGAAGTGTTTTTGCGTGGTTGTTTGATCAACTACGTTA ATCTATCTACCCCACAATGTCATTTTCCGATCTCTGAAGTTATTTTTTAAGAGAGTGTTTTTGTTGGGAGAATTTGATTTATCAAATTCCTCTTTCTTAC CCTCTTTCACTTTTGTAAAACGAGTGCAATTTATTAACGTGGAGCAGGTTTTTTAATATGAAATACGCAGCAGGGTTTATCGTTTATGTTGTTCGATTTC AATGTCTCTTTGTGTTCTGTCTATTCTGTATAAAACTATTTTGATTACTAGTGATTAAATTACAAATATTTCTTTTGTTTATTTCAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_140725; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_276612
| Blastp | Transcription factor bHLH18 from Arabidopsis with 37.88% of identity |
|---|---|
| Blastx | Transcription factor bHLH25 from Arabidopsis with 51.2% of identity |
| Eggnog | basic helix-loop-helix (bHLH) family protein(ENOG41107SX) |
| Kegg | Link to kegg annotations (AT2G22750) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445966.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |