Id Trinity | TRINITY_DN45783_c0_g1_i4 |
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Name Transcript | Ll_transcript_276618 |
Sequence | TAAGTATATAAGCCTCCCCTAATACGAAACAAAAAAAACCATCCAATCCATTACTCATAATTCCATTAGCACCACCATCATCGTCCACATGGATAGCTTT TGGATTTGGTGGATTCTAGCTGTTACTCAGATACTTCCAATTTTTTATTCAAACCCTTTGATTCAAACCATTCATGCCAAGACCCCACAATCTCCTGTTG AATGCAACCAATCTGGTTGCACTCTTCAAAATTCATATGGTGGTTGGGGAGACCGAAAAGACTGCGTTGCCCTCAACATAACATACCCAACAACAGAAGA GGAGTTTCGCTTGGCTGTTTCACAAGCTGTTCAAAAAAACCTTAAAGTTAAGGTTGTTACAAAATTCTCACACACAATTCCAAAGCTAGCATGCCCAGAA GGAAAAAACAATTCTTTGTTAATCAGCACTGAAAAATATGACTCTAGCATCCAAATTGATGATGCAAATTTAGCAGTCACTGCTGATTCAGGTGTTGGGC TTCGTGCTTTGATTGATGCGGTGGAAGATGCAGGGTTTAGTTTGGTGGCTTCACCTTATTGGGAGGGTGTTAGCATTGGAGGGCTTATTAATACTGGAGC ACATGGAAGTTCTTGGTGGGGGAAAGGTGGTGCTGTTCATGATCATGTTATTGGACTTAGTATTATTGTCCCTGCTTCAGAATCTGAAGGGTATGCCAGG ATTTTAAGGTTGGAAGCACAAGATCCTCTGTTTAATGCAGCCAAAGTATCACTAGGAGTTTTGGGTGCCATTTCAAAGGTAAAGTTATCAATTGAGCCTA GATTCAAAAGAAGCATAACCTACAATTTCACAGATGATGCTAATATTGAAGATGTGTACACAGATCATGCAAAGAAGTATGAATTTGCAGATATAACTTG GTATCCATCAAAAAATACCTCTGTGTATAGATATGATTCCAGGGTTCCCTTAAATACTTCAGGGGATGGAGTCTATGACTTTATTGGGTTTCAAGGCAAC TCCATTTTGATCTCAAAATCAGTTAGAGCAGCAGAGAAAATGCTGGAAAATGCAAAAAATGCGAAAGGGAAATGCTTAACAGCAGCTGCTACTTTGGGAT TCAAGAAATTAACGGGCAATGGATTGAAGAATAATGGCCTACTCTTCACTGGCTACCCTGTAGTTGGTTATCAAGGCAAAATACAAACCTCGGGTTCGTG CTTGTATTCGACAAGATTTGATACTGCGTGTGCTTGGGATCCCAGAATTGATGGGCTGTTCTTCTATGAGAGTACAGCAATCTTCCTTGCTTCCAAATTC GGAGACTTCATCCGCGATGTGAGGAAACTTAGAGACCTAAAGCCAGAAAATTTCTGTGGGATAGACAACTACAACGGAATTTTGATACGCTTCATCAAAG CCTCGGATGCATATCTAGGACAATCAGAAGACTCTGTAGTGATTGATTTCAACTATTATCGTTCAAAAGACGCATCGACTCCTAGACTAAACCAGGATGT GTGGGAAGAAGTGGAGCAATTGGCATTCTTCAAGTGTGGGGCTAAGCCACATTGGGCAAAGAACAGGAAATTAGCATTCTTAGGGGTACAGAAAAAGTAT CCTAAGTTTGACCAATTTATTGCAGCAAAACAACAATTGGATCCAAAAAGTATGTTCTCTAGTACATGGTCAGATGAGATATTGTATGGAAAGGAATCAG AAAAATTTGATGGGTGTGCTTTAGAGGGACTATGTATATGTGCTGAAGACAAACATTGCAGCCCACAATTGGGGTATTATTGTAAAGAAGGCCTTATCTA CAAAGAAGCTAGAGTTTGTAGGTATTCATCACCCTCCAAAACAATAACCTCCACAGTATGATGTGCCTTTTTATAGCACAAAGCTTTACCTTTGTGCTCA GAGCAAATTCCTTTCTTCCAATTTCTTGTTTCCCTTACAGTCAATAGTCTCATAATAAATTCAAGTTCTTGTCAATGTTTACATAAAAAAGGTGCTTGCA TTAACTTAAATAGAAATGTGGGTCAGCATACAGTAATTATTCAAAGACAAGTATATATAATGTTAAATTATATTTACGTATAATAATCAATTAGAATAAT AAAAGTTAATATGGATCATTG BLAST |
Tissue | pods |
Gene name | LI_gene_140734; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_276618
Blastp | L-gulonolactone oxidase 3 from Arabidopsis with 66.09% of identity |
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Blastx | L-gulonolactone oxidase 3 from Arabidopsis with 66.2% of identity |
Eggnog | FAD linked oxidase domain protein(COG0277) |
Kegg | Link to kegg annotations (AT5G11540) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429827.1) |
Pfam | FAD binding domain (PF01565.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |