Ll_transcript_277178

• Id Trinity: TRINITY_DN45791_c0_g1_i1
• Name Transcript: Ll_transcript_277178
• Sequence: ATTCAACTGCAATTGTCCCCTCTCTCTCTCTCTTCTAATTCTACGTTCAGGTTTTAAGTTATGCAATTGTTGAGTGTGTGCTGAAAGAATAAGGTATTGG GAAATTGAATTTCTATCAAGTTTGTTTAGTGATGGAACACAACTTATTAGAGGAGCTTGTGGGTTCAGAGATACATGGCTTCCACAAATTGCATGAGCTG GATGTTCAGAACACTATGGAAGAAGCAAAAAGCCGATGGCTACGCCCTAATGAGATTCATGCCATACTCTGTAATCCCAAGTACTTCACGATCCGTGTCA AGCCAGTGCATTTGCCCAAAAGTGGCACTATTGTATTATTTGATCGCAAGGTGCTTAGAAACTTTCGAAAAGATGGGCACAATTGGAAAAAGAAAAATGA TGGAAAAACTGTTAAAGAGGCTCATGAGCACTTAAAAGTGAGGATTTTCATTTAATTGAGTGTTTATTTAAATTTTTGTTGTAGCAAATAGCCTTTTGAA TTTAGCATCTTGAACATTTATCCCGAGGTTTAAATGGTTTCTTCTAATAATCTGTGATGTTTTCCTCTGTCCCTCTTGATTAAACTGTCTTTATGGTTTT ACTGAAACTTCGGTTTTTTATAGAGGCCGATGCCAAAGATTGATCATTATAGCCCATTCCACCTGGTGGTATAAGGCTTCGTCGTTCTATAGTTTGTATG CATTATTTAGTCACATTTTTATCGTTCTTTCTAGGTAACATTTGCTGAATAATTTATGTTTATCTTTTAAATCTTATCACCAGATTCTGTGATCAGCTTT TCTTCTACAGTTTTGTTTGACCTGATTCTGATGTAAGATTGGGTCACTAATGATGCATGTATCTGACTTTTTACATTCTTTCTGGTTATCCCTTTTCCCT CATAAATCAGGTTGGTACTGAAGAAAGGATCCATGTATATTATGCCCATGGACAAGATAACCCGAGCTTTGTTCGTAGATGTTATTGGTTGCTTGATAAG AGTCTGGAGCATGTAGTCCTTGTTCATTATCGTGAAACACAGGAGTTGCAAGGTTCTCCTGTCACACCTGTATATTCAAATTCAAGTTCTACCTCTGATC CAACCGCACCTTCGATTTTACCGGAAGGCTTAGATTCTGGGACCAACATTGCTTATGCTGATGGGCTTAATGACAATTTAACAGTCAAAAGTCACGAAAT AAGACTTCATGAGCTTAACACACTTGAATGGGATGACTTAGTGGCTTCAAATAATGACATCTCTACAAAACCTGCTGAAGCCAATATTCCATGTTTGCAT CAACAAAATCAAAGTTTACTCAATGGAAGCTTTGGCCATGTAGCAAGCAATCCTTCTGCAGAAGGTCGTTCTTTTGATAATTCAACACAGCCAATTTCTG GGAGAAATTGTGTTCCGTACGGTTTTCAAGAAATTGTTAACGTTCAAAAGGATTCTCCTATATCTTTGGGTGGTGTTGATTCCTTAGACACTTTGGTCAA CGGGGGCTTGCAAAGTCAGGACAGCTTCGGGAAGTGGATAAATGACATCATATTGGATTCACCATGTTCTGCAGATGAGTCTGCTCTCAAATCCTCCATT TCTTCATCCGTTCAGAAACCAAATTCATCACTTGGGGTGGATAATCAGAAATCTTCTCTGCCAGAGCAAGTACTTAATATCACTGAGGTGTCTCCTGCAT GGGCATCTTCCACTGAGAAGACAAAGGTCTTGATAACTGGATTATTTCATAATGATTATCAATCACTTGAAAAGTCCAATCTACTATGTGTCTGTGGTGA TGTAAGTGTTCCTTTAGAAATTGTTCAGGTTGGAGTTTACCGATGCTGGGTATCACCACATTCTCCTGGATTTGTGAGTCTCTATATGAGCTTGGATGGC CATAAGCCTATTAGCCAAGTTGTTAATTTTGAGTATCGCACTCCTGTTTTGCATGATCCTGCCGCTTATATGGAAGAGAAACACAACCGTGAAGAGTTTC GACTCCAGATGAGACTTGCTCATTTGCTCTTTACTACACAAAGGAGCCTTGATATTTTCTCTAGTAAAGTATCACCTAATGCACTGGAATATGCTAGGAA GTTTGTCTCCAAAACATCGTTCATGGCCAACAGTTGGCAATACTTGATGAAATCAATCGATGACAATACAATTCCATTTTTACAAGCAAAAAATGACTTG TTTGAAATTTCATTGAGAAATAGACTAAAGGAATGGCTTTTGGAGCGAATTGTCATAGGCAATACTACCGAATATGATGCACAAGGCCAAGGTGTAATCC ATTTATGTGCAATTCTGGGTTATACTTGGGCTGTGTCCTTATTTTCATGGTCAGGCCTGACGCTGGATTTTCGTGACAAATTTGGATGGACAGCTCTTCA TTGGGCAGCATATTATGGAAGGGAGAAGATGGTTGCAACTTTGTTGTCATCTGGGGCTAAGCCAAACTTGGTCACGGATCCAACTCCACAAAATCCTGGT GGATGTACTGCTGCTGATCTTGCTTATGTGAAGGGATATGATGGCTTAGCAGCATATCTTTCAGAAAAATCTTTGGTTGAACAATTCAATGACATGAGCT TAGCTGGAAATATCAGTGGCTCGCTGGAAACTAGCACAAATGATCCAGTAAAATCTGAAAACCTTACTGAGGACCAGCTGTACATGAAGGAAACATTGGC AGCTTACCGAATAACTGCTGAGGCAGCAGCACGTATACAAGCTGCATTTAGGGAGCACTCGCTAAAATTGCGATCACAGGCGATTGAATTTCTCAATCCA GAGGATGAAGCACGCCATATAGTAGCAGCAATGAAGATTCAGCATGCCTTTCGCAACTTCGAGAGTAGGAAAATGATGGCAG
• Tissue: pods
• Gene name: LI_gene_140756;
• Additional information: details;

Expression of Ll_transcript_277178

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.3
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_277178

• Blastp: Calmodulin-binding transcription activator 5 from Arabidopsis with 52.78% of identity
• Blastx: Calmodulin-binding transcription activator 5 from Arabidopsis with 52.78% of identity
• Eggnog: Transcription activator(ENOG410XS5M)
• Kegg: Link to kegg annotations (AT4G15200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418803.1)
• Pfam: CG-1 domain (PF03859.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;