Id Trinity | TRINITY_DN45791_c0_g1_i14 |
---|---|
Name Transcript | Ll_transcript_277195 |
Sequence | ATTCAACTGCAATTGTCCCCTCTCTCTCTCTCTTCTAATTCTACGTTCAGGTTTTAAGTTATGCAATTGTTGAGTGTGTGCTGAAAGAATAAGGTATTGG GAAATTGAATTTCTATCAAGTTTGTTTAGTGATGGAACACAACTTATTAGAGGAGCTTGTGGGTTCAGAGATACATGGCTTCCACAAATTGCATGAGCTG GATGTTCAGAACACTATGGAAGAAGCAAAAAGCCGATGGCTACGCCCTAATGAGATTCATGCCATACTCTGTAATCCCAAGTACTTCACGATCCGTGTCA AGCCAGTGCATTTGCCCAAAAGTGGCACTATTGTATTATTTGATCGCAAGGTGCTTAGAAACTTTCGAAAAGATGGGCACAATTGGAAAAAGAAAAATGA TGGAAAAACTGTTAAAGAGGCTCATGAGCACTTAAAAGTGAGGATTTTCATTTAATTGAGTGTTTATTTAAATTTTTGTTGTAGCAAATAGCCTTTTGAA TTTAGCATCTTGAACATTTATCCCGAGGTTTAAATGGTTTCTTCTAATAATCTGTGATGTTTTCCTCTGTCCCTCTTGATTAAACTGTCTTTATGGTTTT ACTGAAACTTCGGTTTTTTATAGAGGCCGATGCCAAAGATTGATCATTATAGCCCATTCCACCTGGTGGTATAAGGCTTCGTCGTTCTATAGTTTGTATG CATTATTTAGTCACATTTTTATCGTTCTTTCTAGGTAACATTTGCTGAATAATTTATGTTTATCTTTTAAATCTTATCACCAGATTCTGTGATCAGCTTT TCTTCTACAGTTTTGTTTGACCTGATTCTGATGTAAGATTGGGTCACTAATGATGCATGTATCTGACTTTTTACATTCTTTCTGGTTATCCCTTTTCCCT CATAAATCAGGTTGGTACTGAAGAAAGGATCCATGTATATTATGCCCATGGACAAGATAACCCGAGCTTTGTTCGTAGATGTTATTGGTTGCTTGATAAG TATGTATATCAATGTTTAGCTTGACTCTTAATGCCCCAATTCCAATATGTTATGCACATCCATATTTCTTAAGTATGAATTAGTATTTCTTGCATATTTT TTTGGCTAAAGATAAAAAATTAAGTTTTTAAATAGAAATGTGACTTATGACTGTTGCTATATTATTTCTTTCCAGGAGTCTGGAGCATGTAGTCCTTGTT CATTATCGTGAAACACAGGAGTTGCAAGGTTCTCCTGTCACACCTGTATATTCAAATTCAAGTTCTACCTCTGATCCAACCGCACCTTCGATTTTACCGG AAGGCTTAGATTCTGGGACCAACATTGCTTATGCTGATGGGCTTAATGACAATTTAACAGTCAAAAGTCACGAAATAAGACTTCATGAGCTTAACACACT TGAATGGGATGACTTAGTGGCTTCAAATAATGACATCTCTACAAAACCTGCTGAAGCCAATATTCCATGTTTGCATCAACAAAATCAAAGTTTACTCAAT GGAAGCTTTGGCCATGTAGCAAGCAATCCTTCTGCAGAAGGTCGTTCTTTTGATAATTCAACACAGCCAATTTCTGGGAGAAATTGTGTTCCGTACGGTT TTCAAGAAATTGTTAACGTTCAAAAGGATTCTCCTATATCTTTGGGTGGTGTTGATTCCTTAGACACTTTGGTCAACGGGGGCTTGCAAAGTCAGGACAG CTTCGGGAAGTGGATAAATGACATCATATTGGATTCACCATGTTCTGCAGATGAGTCTGCTCTCAAATCCTCCATTTCTTCATCCGTTCAGAAACCAAAT TCATCACTTGGGGTGGATAATCAGAAATCTTCTCTGCCAGAGCAAGTACTTAATATCACTGAGGTGTCTCCTGCATGGGCATCTTCCACTGAGAAGACAA AGGTCTTGATAACTGGATTATTTCATAATGATTATCAATCACTTGAAAAGTCCAATCTACTATGTGTCTGTGGTGATGTAAGTGTTCCTTTAGAAATTGT TCAGGTTGGAGTTTACCGATGCTGGGTATCACCACATTCTCCTGGATTTGTGAGTCTCTATATGAGCTTGGATGGCCATAAGCCTATTAGCCAAGTTGTT AATTTTGAGTATCGCACTCCTGTTTTGCATGATCCTGCCGCTTATATGGAAGAGAAACACAACCGTGAAGAGTTTCGACTCCAGATGAGACTTGCTCATT TGCTCTTTACTACACAAAGGAGCCTTGATATTTTCTCTAGTAAAGTATCACCTAATGCACTGGAATATGCTAGGAAGTTTGTCTCCAAAACATCGTTCAT GGCCAACAGTTGGCAATACTTGATGAAATCAATCGATGACAATACAATTCCATTTTTACAAGCAAAAAATGACTTGTTTGAAATTTCATTGAGAAATAGA CTAAAGGAATGGCTTTTGGAGCGAATTGTCATAGGCAATACTACCGAATATGATGCACAAGGCCAAGGTGTAATCCATTTATGTGCAATTCTGGGTTATA CTTGGGCTGTGTCCTTATTTTCATGGTCAGGCCTGACGCTGGATTTTCGTGACAAATTTGGATGGACAGCTCTTCATTGGGCAGCATATTATGGAAGGGA GAAGATGGTTGCAACTTTGTTGTCATCTGGGGCTAAGCCAAACTTGGTCACGGATCCAACTCCACAAAATCCTGGTGGATGTACTGCTGCTGATCTTGCT TATGTGAAGGGATATGATGGCTTAGCAGCATATCTTTCAGAAAAATCTTTGGTTGAACAATTCAATGACATGAGCTTAGCTGGAAATATCAGTGGCTCGC TGGAAACTAGCACAAATGATCCAGTAAAATCTGAAAACCTTACTGAGGACCAGCTGTACATGAAGGAAACATTGGCAGCTTACCGAATAACTGCTGAGGC AGCAGCACGTATACAAGCTGCATTTAGGGAGCACTCGCTAAAATTGCGATCACAGGCGATTGAATTTCTCAATCCAGAGGATGAAGCACGCCATATAGTA GCAGCAATGAAGATTCAGCATGCCTTTCGCAACTTCGAGAGTAGGAAAATGATGGCAG BLAST |
Tissue | pods |
Gene name | LI_gene_140756; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_277195
Blastp | Calmodulin-binding transcription activator 5 from Arabidopsis with 51.14% of identity |
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Blastx | Calmodulin-binding transcription activator 5 from Arabidopsis with 51.14% of identity |
Eggnog | Transcription activator(ENOG410XS5M) |
Kegg | Link to kegg annotations (AT4G15200) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019418803.1) |
Pfam | IPT/TIG domain (PF01833.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |