Id Trinity | TRINITY_DN45801_c3_g1_i5 |
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Name Transcript | Ll_transcript_356355 |
Sequence | ATCGTTCCATAATATAATAGTATGCTATATGAAAAAAGTAACACAAGCTAAGGTTGGGGTCCATGCAAATAATGAACCTGTCTTCACATTCTCTCTTCAG AACCAAGCTTCTTTTTTCTCCCTATCTCTTCACTACCCTCTTAGCCTTCATCTTCTTCACTGCAATCTTCTATGTTCACCATTTCTTTATCTTTTCTCAA CTCACACCCTTCTCCACATTCCATAACTTGACTCAGTTTCCTAGTCAAGAGAAGAGCAATGTGCATAAGGTAGCATTTGCAGTAGAGGAAACAAAGGAAA GGTGTGATGTGTTTAAAGGAAGGTGGGTTAAGGATGAGTTGGCTCGACCATTGTACGAGGAATCGGAGTGTCCGTACATACAACCACAGTTAACTTGTGA ACATCATGGGAGGCCAGATAAGGACTATCGGCATTGGCGGTGGCAGCCACATGGTTGTGATCTTCCCAAATTCAATGCCAGTTTGATGCTGGAAACGCTT CGTGGGAAGAGGATGATGTTTGTCGGAGACTCCCTTAACCGGGGTCAGTATGTCTCTTTGGTATGTCTTCTCCATAAATTAATTCCTGAAGATGCCAAAT CAGAAGAAACCTTTGATTCACTCACTGTCTTCACAGCCAAGGTACTAGGCATCTTTTGCTACTCTTAGCTTATGCACATTTCACAACTTAACAGTTTTTT GTAACATTTGGTGTAATAGCTCTTGTGAGTTATGACAGTTATGGAGAGTTCTTTAATACTTAGGAAGCAATATGTTATAATAGTAACCATGAATCATGAT ATGATATTGGAGTTATATATGTGGTCATAACATGCTTTATTTCATTAGTCTAAGAAAAATTAGTATTGTTCATTAGTGAAAATTATAGAATATGTAAGGT GTTTTTTATTGGAAATCATTTGAGAAGAAAAGTAATTCATAATTGTTTTTCATTGATTATAATCAATAAGGTTACACACTTATATAGACACTACAAAGAT AGCTTGCAAATGAAGCAAAAGAAAATAGCTAACTCTAATTATCAATAACTAAGTTACTAACACTTTAACACAATTCTACTCATGTCAATTTGAGTGTTCT GCTACAAAATCCATCATTCTAGAAGTCTCATAGAAATTGGCCAGAACACAGGCCAAGTGTGCCTTGACACTTGCCTTGGTATGCCTGGTGCCTGCCTGAT GCGTCTGGCGCCTAGTGCGTGCCTGACTTGCTTTCTGGGATGGTCTCCGGCACAGTCATGGCTTGTACCTGGCACTGTATGCCTTAGTTTCTGGCACGGT CATGGCTTGTGTCTAGCGCACTCTGGCGCGGTCATGGCCTATGTTTGGCTCGGTCATTACCAGCCTTGGCCAAGTGACCAAGCTCCTTCATTCCTTCATA ATTTTTAATTCTCATATAGTTTATCTAAATACCCTGTTAATAATAACAAAAAAATTTATAGGGTGTCTCTTTTATTATTCTTCTAATATAACATTTAGCT ACATTACTATGCCTAGCTATTTTCTCTTTGTTCATGTTGCTACATTTACTTAGGAATACAATGCCACAATTGAGTACTATTGGGCACCTTTTCTTCTTGA ATCAAACTCCGATAATGCTATCATCCATAGGGTCACTGATAGGATTGTGAGAAAGGGTTCAATCAATAAGCATGGCCATTATTGGAAAGGTGCTGACATT GTAGTATTCAATACTTACCTTTGGTGGATAACTGGCTCCAAAATGAAAGTCTTGCTTGGATCTTTTGATGATAAAGAAAAAGTGATTGTTGAGATGCCAA CAGAGGATGCTTATAGAATGGCTATGAAAAGTATGGTTAGATGGGTGAGGCTGAATATGGACACAAACAAGACAAGAGTCTTCTTCACTAGCATGTCACC TTCTCATACCAAGAGCAAAGAGTGGGGTGGTAAAGAAGGAGGAAATTGCTACAATGAAACAACACCAATTGATGATCCTACATATTGGGGTTCAGATTCT GAGAAAAGCATAATGCAAGTAATTGAGCAAGTGTTCAGAAAATCCAAAGTTCCAATTACATTTCTCAACATTACTCAGCTTTCTAGCTATAGAAAAGATG CACATACTTCAATCTACAAGAAGCAATGGAATCCTTTGAGTACAGAACAATTAGCCAACCCTGCTAGCTATGCTGATTGTATACATTGGTGTTTACCTGG ACTTCAAGATACATGGAATGAACTTCTCTTTGCTAAGTTATTTTATCCCTAAAGGGGTCTCAAAGTTGTAGGGATCCTTGTTCTTATAGGGTCCATGCAT GGCAATTGGAGAATTGTGTTATTGTTGGAGTTTGTTAGGTTCATAAAATAAGAATATTATAACAAATAATAGATTAAGAATATTCTTATTTTCATAAAAA TTTCTTAACAATGAAGATGATCTTTGGATTTGAAAGTAAAAAAAAC BLAST |
Tissue | pods |
Gene name | LI_gene_140790; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_356355
Blastp | Protein trichome birefringence-like 33 from Arabidopsis with 75.6% of identity |
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Blastx | Protein trichome birefringence-like 33 from Arabidopsis with 76.62% of identity |
Eggnog | leaf senescence related protein(ENOG410ZJIP) |
Kegg | Link to kegg annotations (AT2G40320) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416820.1) |
Pfam | GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PF13839.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |