Ll_transcript_356122

• Id Trinity: TRINITY_DN45810_c3_g3_i2
• Name Transcript: Ll_transcript_356122
• Sequence: GTTCGATAATAGTAACGGACCTCCTCTTTATTTTTCATGCCCTCATTCACACGATTCTTTTGTTATAGAAAAAATAGAATTAATTTTCTATTTTGGTTCG ATAATAGTAACGGAAAAGATGAAATTTGGAAAGAGTTTGAGTAACCAGATTGAGAAAACACTACCACAGTGGCGAGACAAGTTTCTTTCGTACAAAGAAC TGAAGAAGAAGTTGAAGCTTGTGGAGCCTGCTTCTAAAGGGAGTGATGAGGAGCGAAGTGCTAAGAGGGTTAGGGTTGATGGAGAGAAGATGTTGAAGGA AGAAATTGATTTTAGAAAGTCGTTGGAGAATGAGGTTTATAAATTCAATACTTTCTTTGTTGAGAAAGAGGAAGAGTGTATTATAAGATTCAAGGAGTTA CGTGATATGGTGGCCAAAGTAAAGGATTCTAACGAAGAAATGATGAAAATACGCAAAGAAATTGTGGATTTCCATGGAGAGATGGTCTTGCTCGAAAACT ACAGTGCCCTTAACTACACAGGTTCTTCCAACTTTCATAATATTATTTGTAGGTCTCTGACTAAAACATAGTTTCATAGTTCACGGTACAGATTTTATTG CGCCGTATTCGACTACGCGGTTCATCCACTTTTTACATTATTACAAGACTTTTTTACAAGGAACCGTACGCAGTCGAATCCTGGACATAGGCCTAAACGA GAGAATTATCTATGGACTAGAATACTAGATAGCCTCAGAGCATGTGTACTAGCTGTAAAATTTTCTCAAGCATTATCCAAAATAAAATTTGACTAAAACA ATGTAGCAGAGAGTCTAGTGAATCATAATTTGATTCATTTCCATTGCTTCTACGGCAACAATGTAAAACAAAAAGTATTTTTTTGTTGGAATTAAGGATC TATTTCATATAAATGTGTTCTTTTTAATGAGCATTCAGCTATTTTGAACCTCTGTAGTTGCTTCTTATTCCTCTGTTGCATAGTAATTTGATTTTTATAG ACAAATTTGAATTCTGCAAAATTCAAGAGTCATGTATGCCATTATCAGCCTAAAGTTGGTATTGCATAAACTGTAAATTTTGTCACTTAAGATTCATTTT TCCATGCCTATTAACTGGTTAAGATATCTAATATTCCCTCTCTTTTTGCTCTACAGGACTGGTGAAAATACTAAAGAAGTATGACAAGAGAACTGGTGCT CTCATTCGCTTGCCATTCATTCAGAAGGTCTCGCAACAGCCTTTCTTTACAACCGATCTGCTCTATAAGCTGGTAAAGGAGTGTGAAATCATGCTAGACC ACCTTTTCCCGGTGAACGATCCTCTTACTTATGGTGAGACAACTCCCCAAGTTGAAGGGTGTGATCCTTCAACTTCGGGCACTAGCAAGAGTGATGCCCT GCTGCTCATACCTAAGGAGTTAGCCGAAATCCAGTACATGGAGAGTCTCTATATGAAGAGTACCATATCGGCTTTGAATGTTTTGCAGGAGATTAGAAGT GGAAGCTCGACGGTTAGCATGTTTTCGTTGCCGCCGCTGCAGATAAGTGGTTTGGGAGAAGCATGGAAGAAAATTCCAATTATGGAACAATCAGCCAAGT AAAGTAACCTGCAGTTTACATTTAGGAATTAAGGATAGTTTAATGGGATGGCTATTCCCTCTTTATTTTTTCTGTTAAAATTTGATGTTTCTGTCATGGC ATGCTTTAGATACCAACACAGATATGGGATGCTAAATATAGAGAAAAAATGTTGATCTCTTATATCTTAGGTTCCATGTAGTAATATTACTGACGCTCAT ATTCAATATATAATGTAATTAAATATCTTATATCTGCTTTGTAAGACAATGTTATTGGGCTGTTTTGGAAACTTAGCCTGTTTGCTTTGTGAAAATATTT CCTATTTTCATTTCTTGAAAACAGTTTTCAATTTTAA
• Tissue: pods
• Gene name: LI_gene_140825;
• Additional information: details;

Expression of Ll_transcript_356122

FPKM

• PAB: 1.9
• PNAB: 0.6
• PS1: 0.1
• PS2: 0
• PS3: 0.1
• PW1: 0
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_356122

• Blastp: SPX domain-containing protein 1 from Arabidopsis with 70.8% of identity
• Blastx: SPX domain-containing protein 2 from Arabidopsis with 66.45% of identity
• Eggnog: Vacuolar transporter chaperone(COG5036)
• Kegg: Link to kegg annotations (AT5G20150)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_017442764.1)
• Pfam: SPX domain (PF03105.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;