Id Trinity | TRINITY_DN45810_c3_g3_i3 |
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Name Transcript | Ll_transcript_356127 |
Sequence | GTTCGATAATAGTAACGGACCTCCTCTTTATTTTTCATGCCCTCATTCACACGATTCTTTTGTTATAGAAAAAATAGAATTAATTTTCTATTTTGGTTCG ATAATAGTAACGGAAAAGATGAAATTTGGAAAGAGTTTGAGTAACCAGATTGAGAAAACACTACCACAGTGGCGAGACAAGTTTCTTTCGTACAAAGAAC TGAAGAAGAAGTTGAAGCTTGTGGAGCCTGCTTCTAAAGGGAGTGATGAGGAGCGAAGTGCTAAGAGGGTTAGGGTTGATGGAGAGAAGATGTTGAAGGA AGAAATTGATTTTAGAAAGTCGTTGGAGAATGAGGTTTATAAATTCAATACTTTCTTTGTTGAGAAAGAGGAAGAGTGTATTATAAGATTCAAGGTATCA TTTTTTATCATCTATTTTGTTAGAGTAATTTATTTTGGGGCAATGTTGATTAGTTACGAAATATGGCTAAATACTAAACTTCTACTTGAAAAATGATCTG AAGGGTATGTTTGTAAATTTGGTTTAGGAAGGGAAAGAAAAGGAATCAAAGGTTTTAATCTTAGAAGTGTATTTTATGTATCTCGATCATATCCTTTCCA CAAATATTCCCTCACTTTTTGGAACACATCTGCTGTGGTACAAAGAATAACATGATTGGTTGAAAAAATATCAAAAGTGAAAATAAAAGTATTTAGTCAG TCTTTCTTTCATTAAAAAATGAGATTAATTTATTCTACGATGATATCAAATGTTCCTTAACTAAACATTTTTTCATGACCTGAGGAACTAAATCAGTTTC AATTTTTTTAAGAGGACCAGATTGGAATATCTTTTTGAGTAATAAAATGAGTGTTGATATTTTCAAAACAATGATATATGAATATTGGGACAAATAGCTA TGATTTTTGTGTGTGAGAAAGTTTTTGTTGTTGAAATATGCAGGAGTTACGTGATATGGTGGCCAAAGTAAAGGATTCTAACGAAGAAATGATGAAAATA CGCAAAGAAATTGTGGATTTCCATGGAGAGATGGTCTTGCTCGAAAACTACAGTGCCCTTAACTACACAGGTTCTTCCAACTTTCATAATATTATTTGTA GGTCTCTGACTAAAACATAGTTTCATAGTTCACGGTACAGATTTTATTGCGCCGTATTCGACTACGCGGTTCATCCACTTTTTACATTATTACAAGACTT TTTTACAAGGAACCGTACGCAGTCGAATCCTGGACATAGGCCTAAACGAGAGAATTATCTATGGACTAGAATACTAGATAGCCTCAGAGCATGTGTACTA GCTGTAAAATTTTCTCAAGCATTATCCAAAATAAAATTTGACTAAAACAATGTAGCAGAGAGTCTAGTGAATCATAATTTGATTCATTTCCATTGCTTCT ACGGCAACAATGTAAAACAAAAAGTATTTTTTTGTTGGAATTAAGGATCTATTTCATATAAATGTGTTCTTTTTAATGAGCATTCAGCTATTTTGAACCT CTGTAGTTGCTTCTTATTCCTCTGTTGCATAGTAATTTGATTTTTATAGACAAATTTGAATTCTGCAAAATTCAAGAGTCATGTATGCCATTATCAGCCT AAAGTTGGTATTGCATAAACTGTAAATTTTGTCACTTAAGATTCATTTTTCCATGCCTATTAACTGGTTAAGATATCTAATATTCCCTCTCTTTTTGCTC TACAGGACTGGTGAAAATACTAAAGAAGTATGACAAGAGAACTGGTGCTCTCATTCGCTTGCCATTCATTCAGAAGGTCTTGCAACAACCTTTCTTTACC ACTGATCTCCTCTATAAGCTTGTAAAGGAATGTGAACTAATGCTGGACCGCCTTTTCCCAGTAAATGATAATCCGGCTTCCGATGAGGCAACTCCACAAG TTGAAGGGTGTGATCCTTCAACTTCAGGCACTGCGAAGAGTGATAATCTTCTTCTGGGACCTAAGGATTTAGCAGAAATCCAGGACATGGAGAGCCTATA TATGAAGGGTACCATATCAGCTCTGCATGTTTTGCAGGAAATTAGAAGCGGGAGCTCGACGGTTAGCATGTTTTCTTTGCCGCCGCTGCAGATAAGTGGT TCAGGAGAAACATGGAAGAAGATTCCGATTATGGAACAATCAGCCAAGTAAAGTAATCTGCAGTATTACATTTAGGAGTTAAGGATGGTTCACTGGAATG GATATTCCATTATTTTTCTTTCTTTTAAAATCTGATGCCTCTGTTATGGCATGTTTTAGATACCAACACAGTTGTATGATGCTAAACATAGAGAAAATAT TGGTCTCGTAGAATCATGGGTTCCATGTAGTAAAATCTGAAATTGATAGAAGATGTCATGTTTTAACATTTCATTGACGCGCATTCAATATATAATGTAA TTACTTCTCTGTCTGCATCGTGATTTAATTCATAGTTATTTGTAAGATGTTAAACGAAATATATGTTATAAATAATAATGTTAATGTTGATACAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_140825; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_356127
Blastp | SPX domain-containing protein 2 from Arabidopsis with 56.88% of identity |
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Blastx | SPX domain-containing protein 2 from Arabidopsis with 65.81% of identity |
Eggnog | Vacuolar transporter chaperone(COG5036) |
Kegg | Link to kegg annotations (AT2G26660) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431296.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |