Ll_transcript_356142

• Id Trinity: TRINITY_DN45810_c3_g3_i8
• Name Transcript: Ll_transcript_356142
• Sequence: CGCGAATATCCTCTTCCTCTTCTCACTATATCATTTCCACATTCCTTCTCTTTCTCTCTATTTTTTCTCATCCTTTCATTACATCCACACACACATTCTT CTTATTTTCTACTTTCTTAATAATAGAAACAACAAAAACATGAAATTTGGAAAGAGTTTGAGCAACCAGATCGAGAAAACATTACCACAGTGGCGCGATA AGTTTCTTTCTTATAAGGAACTGAAGAAAAAATTGAAGCTTGTTGAATCTGCTGCTGAAAAAGGGGATGAGGAACGAGCAAGTAAACGAGCCAGAATCGA TGGAGAGAAGATGTTGAAGGAAGAAATTGATTTCAGGAAAGCGTTGGAGAATGAGCTTCATAAATTCAATAATTTTTTCGTTGAGAAAGAAGAAGAGTAC ATTATCAGATTGAAGGTATTGGTTTTTTTTTTACGTTTATTTGATTGCCCAGATGTTTTTTGTTTCGAATATTTAGAAATTTTTCTTTTTTTTTATTTGG GTAAAGGTAGACCTTATGTTTTTTATATTCATATGGGTCATTGACTGGTTATAATTTTTTATGATAAAAATTAAAAATTATTAGTGGTATAAACAATATA GTCATCCAAATGTAAAATTAACTTTTTTAATATATAGTTGGATTCGGTTCTAACTGTTCCTAAATTTCCACATGAGTTTTCCAAAATAAAAAAACCGAAC TGAATCGTGAAACCAAACTTAATCGTGTTTTGTGGTGTGTGAATATATGGATTAAGATTTCTATGATTTTGGTGTGTGAATAATGTGGTTGTGGTTGAAA TATGCAGGAGTTACGGGATAGTGTGGCCAAAGTAAAGGATAATAATGAAGAACTGATGAAAATACGAAAGGAAATTGTTGATTTTCATGGAGAGATGGTG TTGCTTGAAAACTACAGTGCCCTTAACTACACAGGTACTTTCAACCTTCAAAGCTCAAACTAGAATACTAGATAGCCTCAAAACATGTGCACTAGTTGTA AATTTTGCTTGAGAATTATCTAAATTAAAATTTGACTAAAATGTAACAGATAGTCTAGTAAATCAGAACTGGGTTCATTTCCAATCAACAAGGTGAAACA AAGAACATGTTTTGTTGGAATGGAGCATCTATGTCATATATTTGAGTCTTTTTTATGAACAGTCAACTGTTTTGATTCATCTGTAGTGTCTTCTTATTCT TCTGACTACTTTAATAAACCAATTCCAGGATAGTTTGTTGCGTCAAATGTTTTATTTTGTTTAACCAAGGGTATCCTTTAAGGAATTAATCCTTCAGGAT CTGTGGCTGTCCCTACCAACATGTGCCACTCCCGAGAATTAGACCAATACCTTTTTGATAGATGTTATAATTAAAATGAAATGATGAGATCCGATATTCC TGTTGCGAATATACATAGCAGTGATAGCACAGATAACCTGGAAAAGGCACTCTCACTGAACATAGTGATTTGATTTTCGATGAAAGTTATAATGTTTCAA AATGCTGCAAAATTCAGTAGGCATATCAACCAAATGTTTTTATTAATAATGAAAAACTTTACATTGAAATTGAATAGCTATGGAGGTATATGCCTCAGTG ATCATTGAACCTAAAGCTTGTATTGCATATATTGAAGATTGGGTTACTTGAGATTCATTTTTTATCCTCTTAACCAATTAAAATATCTTTCTCTCTACAG GACTAGTGAAAATATTGAAGAAATATGACAAGAGAACTGGTGCTCTTATTCGCTTGCCATTCATTCAGAA
• Tissue: pods
• Gene name: LI_gene_140825;
• Additional information: details;

Expression of Ll_transcript_356142

FPKM

• PAB: 1.5
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.2
• PS3: 0
• PW1: 0
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_356142

• Blastp: SPX domain-containing protein 1 from Arabidopsis with 67.02% of identity
• Blastx: SPX domain-containing protein 1 from Arabidopsis with 75.56% of identity
• Eggnog: Vacuolar transporter chaperone(COG5036)
• Kegg: Link to kegg annotations (AT5G20150)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431296.1)
• Pfam: SPX domain (PF03105.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;