Id Trinity | TRINITY_DN45811_c0_g1_i16 |
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Name Transcript | Ll_transcript_357006 |
Sequence | ATCCAACATGTTGTTCACTGTTTGGACTTGAAGAGATTCCAATCTCTGTTTTTTAGCGGCTCATAATTTTAGTCTTTCCAAATTAAATAACTTATATTTA TCTAAACTCCAGTCTTGTTGTTCTTTGAGTTATCTATGGCTTCTCACATTGCTTTCTTTCATGCTTCTCCTTTTTCAATACCCACCCAACAACAACAACG CTTATTCTATCCCAAACACAGTCGTTTAATAATAAATACACTCAAACCAACAACACCAACCACTTCTTCTTCTTTCTTTCCATGTTCTACAGTAACCACA AAAAGAAGATTTGTTTCACAAGTGATTTCATGCTCTTATTCAAATGGAAGAGTGCCTGATTCGGCGGAGGAGGAGGAGGAGGACGGTGTAAAGAGTGCCG AGCGCCTCCGCGAAGAGAAGCGACGGGCTGAACTGTCTGCTAGGATTGCTTCTGGAGAATTCACTGTGCAGGAGCAACCTGGTTTGCCTTCTATATTGAA GAAGAGCATATTAAAAGTGGGGGTGCCAAAGGAGGCTGTCGAGTTTTTATTCGGTTGGGTGGAAGGGCGTGGTGGCTACCCCAAAATTCCCGAGGCAAAA GGGTCAATAAGCGCCATTCGAAGTGAGGCCTTCTTCATTCCCTTGTATGAACTTTACCTCACATATGGTGGGATTTTCAGGTTGACATTTGGACCAAAGT CCTTTCTGATTGTGTCCGATCCATCTATTGCAAAACACATCTTGCGAGACAATTCAAAGGCTTATTCGAAGGGTATCTTGGCTGAGATCCTAGAGTTTGT GATGGGGAAAGGACTCATCCCAGCTGATGAGGAAACATGGCGAGTCAGACGACGTGTTATAGCCCCAGCATTGCATCAGAAGGTTTCGTTATTAGACTGA TTATTTAAAGTTCGTGTTGAATCATTTCCAACATGTACGTGATGATATCCTGGCAGCAAAGGTCATGGATTGAACTGTTCCTTCTCAGATAAGGAATTTG TATTAATACTTTATGTAGATAAGAATGTCTATCAACACAAACAAAACAACATAAATACATTTTTCGCTAGCCAAATTGAGTTATTTGAAACTTTTCGAAT CACTAATCGATGTTCACCATTAGAATGTCATTTGTGACATGGAAAAAATAGAGCAGTATCTATGATCTCATTCATTTTATGTAATGATTAATCTCGAGAG TCGAGATGTTCATAGCTACCCACCCGTACTTATACTTATTTCAAATCTCTGCGACAACTTTGCTATCTTGTTTCTTGATTTTGTTTTTTGAATGTGATTA TAGTATGTAGCAGCTATGATTGGCCTTTTTGGACATGCTACTGATAGGCTTTGCAAGAAGCTAGATAGTGCTGCATCTGATGGAGAAGATGTTGAGATGG AGTCACTTTTCTCACGTTTGACTTTGGACGTCATCGGCAAGGCTGTATTCAATTATGATTTTGATAGTTTAACAAATGACACGGGTATAGTTGAGGCCGT TTATACTGTCCTGAGAGAAGCAGAAGATCGAAGTGTTTCTCCAATTCCAGTGTGGGAGATCCCAATATGGAAAGACATATCACCACGTCAAAGGAAGGTT GCTTCAGCTCTCAAATTGATCAATGATGTACTTAATGATCTGATATCAATATGCAAGAAAATGGTAGATGAAGAAGAGCTTCAGTTTCATGAGGAGTACA TGAATGAAAAAGATCCAAGTATTCTTCACTTCTTGTTGGCATCAGGAGATGATGTATACTAGTTTTCTGTCAAATTGTGTTAGTTGATGAAAAAATGTCT GTTAGTGCAAAATAAATGACTTTTTGTAGGTGACAAGTAAGCAACTCCGTGACGACTTAATGACAATGCTCATTGCTGGACATGAAACGTCAGCTGCTGT TTTAACTTGGACCTTTTATCTTCTATCCAAGGAGCCAAGGGTCATGTCCAAGCTCCAAGAAGAGGTTGACTCTATAATTGGAGATCGACTTCCAACTATT GAAGACATGAAGAAACTAAAATATGCAACTCGAGTGATCAATGAGGTATAAAAATGACATAATAGTTGTAATACTGTTTAAACTGTGGCTCTTCTATTGC TAATGGTTGACTTTTCCTGATATGTTCAATATTTAGTCATTGAGGCTTTACCCCCAACCACCGGTGTTAATCCGCCGCTCTCTCGAGAATGATCTACTTG GAGAGTATCCTATAAAAAGGTAATTCCAATAGATGCATTATCTTTGCTATGTTTAGCTGCTTAAGGTACACTCTTTTCAATGTTTCTTATATTTTTGTGT GTTTATCTTCTACTTTATTATAGTATTAATCAAAAGTATGAGCTAAGAGTTCCTAGGTTCAATTAAATCACACTCAACTTCTATCTTTTTTTGGAAAATA TACTGACCCCCTTATTTTGAAATTTCATGGCTAGATAGACCCATTTAAATTCTTTCCTGACACATATAAGCCCACCCTACTCACTGTGTAGATGAAAAAT GAAAGACAAATCTAGTGGAACCTCAAGGGGATTTCGATATATTCATTTTATTTTGCTGCAATATATATCTAGAGTTTGAGTTTATGGTTATGTCATTAAA TTCCATGCAGAGGAGAAGATATCTTCATATCGGTCTGGAACCTGCATCACAGTCCAAAACAGTGGGATGATGCTGACAAGTTTGAACCTGAAAGATGGGC CTTAGATGGACCTAACCCTAATGAGACGAATCAAAATTTCAGGTATTTACCATTCGGGGGAGGACAACGGAAATGTGTAGGTGACCTGTTTGCTACTTAT GAGACTGTAGTAGCACTTGCGATGCTTGTCAGGCGGTTCAACTTTCGAATCGCGGATGGAGCTCCACCGGTTGAGATGACTACTGGAGCCACAATTCATA CAACACAAGGGTTGAACATGACCGTAACACGAAGAACAAAACCTCTCGTTGTTCCTTCTTTACAAGCGTCGTCGACATTGGAAGTGGAACCATCTGTGAG CCCTTGAGATGAACATGAATTAAGTCAGAAAGGAATTTTTCAGGCTTGGTCTGGATTGTTGGTGCAGTACATAAACCTTACATTATAGAAGAGTGAAGGG GAAGATGCAAATTGTAGAGTTCCTTTTTATTTTTCAACTTTTTTATGTTTTCTTGGCTGTTTATGTGATTAATGTAGTGAGAGGTGAAACTTTATGGCCA ATCCACCCCATTCCCTGGGGTCATTTTTTCAAGGGAGAGCAAAAAACCTTTAAAAAAGGATTAGGGCAGAACATTAAATCTTTTACATTTTTAAAAAAAA TAGAATTATAAATTTATAAACAAATAAGAAATGTTAAAGAGGTTGAACAAAATAAAATTTAGTGCTGTCGGGTG BLAST |
Tissue | pods |
Gene name | LI_gene_140832; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_357006
Blastp | Protein LUTEIN DEFICIENT 5, chloroplastic from Arabidopsis with 70.39% of identity |
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Blastx | Protein LUTEIN DEFICIENT 5, chloroplastic from Arabidopsis with 86.09% of identity |
Eggnog | Cytochrome p450(COG2124) |
Kegg | Link to kegg annotations (AT1G31800) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429423.1) |
Pfam | Cytochrome P450 (PF00067.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |