| Id Trinity | TRINITY_DN45811_c0_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_357009 |
| Sequence | ATCCAACATGTTGTTCACTGTTTGGACTTGAAGAGATTCCAATCTCTGTTTTTTAGCGGCTCATAATTTTAGTCTTTCCAAATTAAATAACTTATATTTA TCTAAACTCCAGTCTTGTTGTTCTTTGAGTTATCTATGGCTTCTCACATTGCTTTCTTTCATGCTTCTCCTTTTTCAATACCCACCCAACAACAACAACG CTTATTCTATCCCAAACACAGTCGTTTAATAATAAATACACTCAAACCAACAACACCAACCACTTCTTCTTCTTTCTTTCCATGTTCTACAGTAACCACA AAAAGAAGATTTGTTTCACAAGTGATTTCATGCTCTTATTCAAATGGAAGAGTGCCTGATTCGGCGGAGGAGGAGGAGGAGGACGGTGTAAAGAGTGCCG AGCGCCTCCGCGAAGAGAAGCGACGGGCTGAACTGTCTGCTAGGATTGCTTCTGGAGAATTCACTGTGCAGGAGCAACCTGGGGAAAAGCATAATATATG ACATTTGAAACCTAATAATCTGCGCCGAGGTGAAAATACTCATTTCGGGTTTGCCTTCTATATTGAAGAAGAGCATATTAAAAGTGGGGGTGCCAAAGGA GGCTGTCGAGTTTTTATTCGGTTGGGTGGAAGGGCGTGGTGGCTACCCCAAAATTCCCGAGGCAAAAGGGTCAATAAGCGCCATTCGAAGTGAGGCCTTC TTCATTCCCTTGTATGAACTTTACCTCACATATGGTGGGATTTTCAGGTTGACATTTGGACCAAAGTCCTTTCTGATTGTGTCCGATCCATCTATTGCAA AACACATCTTGCGAGACAATTCAAAGGCTTATTCGAAGGGTATCTTGGCTGAGATCCTAGAGTTTGTGATGGGGAAAGGACTCATCCCAGCTGATGAGGA AACATGGCGAGTCAGACGACGTGTTATAGCCCCAGCATTGCATCAGAAGGTTTCGTTATTAGACTGATTATTTAAAGTTCGTGTTGAATCATTTCCAACA TGTACGTGATGATATCCTGGCAGCAAAGGTCATGGATTGAACTGTTCCTTCTCAGATAAGGAATTTGTATTAATACTTTATGTAGATAAGAATGTCTATC AACACAAACAAAACAACATAAATACATTTTTCGCTAGCCAAATTGAGTTATTTGAAACTTTTCGAATCACTAATCGATGTTCACCATTAGAATGTCATTT GTGACATGGAAAAAATAGAGCAGTATCTATGATCTCATTCATTTTATGTAATGATTAATCTCGAGAGTCGAGATGTTCATAGCTACCCACCCGTACTTAT ACTTATTTCAAATCTCTGCGACAACTTTGCTATCTTGTTTCTTGATTTTGTTTTTTGAATGTGATTATAGTATGTAGCAGCTATGATTGGCCTTTTTGGA CATGCTACTGATAGGCTTTGCAAGAAGCTAGATAGTGCTGCATCTGATGGAGAAGATGTTGAGATGGAGTCACTTTTCTCACGTTTGACTTTGGACGTCA TCGGCAAGGCTGTATTCAATTATGATTTTGATAGTTTAACAAATGACACGGGTATAGTTGAGGCCGTTTATACTGTCCTGAGAGAAGCAGAAGATCGAAG TGTTTCTCCAATTCCAGTGTGGGAGATCCCAATATGGAAAGACATATCACCACGTCAAAGGAAGGTTGCTTCAGCTCTCAAATTGATCAATGATGTACTT AATGATCTGATATCAATATGCAAGAAAATGGTAGATGAAGAAGAGCTTCAGTTTCATGAGGAGTACATGAATGAAAAAGATCCAAGTATTCTTCACTTCT TGTTGGCATCAGGAGATGATGTATACTAGTTTTCTGTCAAATTGTGTTAGTTGATGAAAAAATGTCTGTTAGTGCAAAATAAATGACTTTTTGTAGGTGA CAAGTAAGCAACTCCGTGACGACTTAATGACAATGCTCATTGCTGGACATGAAACGTCAGCTGCTGTTTTAACTTGGACCTTTTATCTTCTATCCAAGGA GCCAAGGGTCATGTCCAAGCTCCAAGAAGAGGTTGACTCTATAATTGGAGATCGACTTCCAACTATTGAAGACATGAAGAAACTAAAATATGCAACTCGA GTGATCAATGAGTCATTGAGGCTTTACCCCCAACCACCGGTGTTAATCCGCCGCTCTCTCGAGAATGATCTACTTGGAGAGTATCCTATAAAAAGAGGAG AAGATATCTTCATATCGGTCTGGAACCTGCATCACAGTCCAAAACAGTGGGATGATGCTGACAAGTTTGAACCTGAAAGATGGGCCTTAGATGGACCTAA CCCTAATGAGACGAATCAAAATTTCAGGTATTTACCATTCGGGGGAGGACAACGGAAATGTGTAGGTGACCTGTTTGCTACTTATGAGACTGTAGTAGCA CTTGCGATGCTTGTCAGGCGGTTCAACTTTCGAATCGCGGATGGAGCTCCACCGGTTGAGATGACTACTGGAGCCACAATTCATACAACACAAGGGTTGA ACATGACCGTAACACGAAGAACAAAACCTCTCGTTGTTCCTTCTTTACAAGCGTCGTCGACATTGGAAGTGGAACCATCTGTGAGCCCTTGAGATGAACA TGAATTAAGTCAGAAAGGAATTTTTCAGGCTTGGTCTGGATTGTTGGTGCAGTACATAAACCTTACATTATAGAAGAGTGAAGGGGAAGATGCAAATTGT AGAGTTCCTTTTTATTTTTCAACTTTTTTATGTTTTCTTGGCTGTTTATGTGATTAATGTAGTGAGAGGTGAAACTTTATGGCCAATCCACCCCATTCCC TGGGGTCATTTTTTCAAGGGAGAGCAAAAAACCTTTAAAAAAGGATTAGGGCAGAACATTAAATCTTTTACATTTTTAAAAAAAATAGAATTATAAATTT ATAAACAAATAAGAAATGTTAAAGAGGTTGAACAAAATAAAATTTAGTGCTGTCGGGTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_140832; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_357009
| Blastp | Protein LUTEIN DEFICIENT 5, chloroplastic from Arabidopsis with 85.71% of identity |
|---|---|
| Blastx | Protein LUTEIN DEFICIENT 5, chloroplastic from Arabidopsis with 82.03% of identity |
| Eggnog | Cytochrome p450(COG2124) |
| Kegg | Link to kegg annotations (AT1G31800) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429423.1) |
| Pfam | Cytochrome P450 (PF00067.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |