Id Trinity | TRINITY_DN45811_c0_g1_i4 |
---|---|
Name Transcript | Ll_transcript_356994 |
Sequence | GTGACAAGTAAGCAACTCCGTGACGACTTAATGACAATGCTCATTGCTGGACATGAAACGTCAGCTGCTGTTTTAACTTGGACCTTTTATCTTCTATCCA AGGTAACAGATAATTGAGGTTCAAGGAAGAAGGGAATTATTTTTCTTTCTTGTCTATTATTTTTTCGTATTCCATAGAAGTTTTTTTTAGCAGAACTGAA GTGTGCAATATTTTTTTTGGAAAATGGTACTTCTGAATGCGCTTAAACTTAACAAAGTAGAAGTCGCACTCACTCGCACACAGATATATATATTCTTCTA GTAATAGTTATGCATGTGAGCTTTGCTGTTATTCAACCTTATGCAGAAATGGATACAGTTTTTTGTGTCAATTTGTTTGGTGTAATAAGAAAGTTAACAA ATAATTTTTCATGCAGTAGTGGCTAATAGAATAATATACTTTCTTCCTTTTTTTATTGGCTGCAGGAGCCAAGGGTCATGTCCAAGCTCCAAGAAGAGGT TGACTCTATAATTGGAGATCGACTTCCAACTATTGAAGACATGAAGAAACTAAAATATGCAACTCGAGTGATCAATGAGTCATTGAGGCTTTACCCCCAA CCACCGGTGTTAATCCGCCGCTCTCTCGAGAATGATCTACTTGGAGAGTATCCTATAAAAAGAGGAGAAGATATCTTCATATCGGTCTGGAACCTGCATC ACAGTCCAAAACAGTGGGATGATGCTGACAAGTTTGAACCTGAAAGATGGGCCTTAGATGGACCTAACCCTAATGAGACGAATCAAAATTTCAGGTATTT ACCATTCGGGGGAGGACAACGGAAATGTGTAGGTGACCTGTTTGCTACTTATGAG BLAST |
Tissue | pods |
Gene name | LI_gene_140832; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_356994
Blastp | Protein LUTEIN DEFICIENT 5, chloroplastic from Arabidopsis with 82.54% of identity |
---|---|
Blastx | Protein LUTEIN DEFICIENT 5, chloroplastic from Arabidopsis with 78.83% of identity |
Eggnog | Cytochrome p450(COG2124) |
Kegg | Link to kegg annotations (AT1G31800) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429423.1) |
Pfam | Cytochrome P450 (PF00067.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |