Ll_transcript_356765

• Id Trinity: TRINITY_DN45812_c1_g3_i3
• Name Transcript: Ll_transcript_356765
• Sequence: TCCAAATAAAGCAAGTTTGTGTGTGAGTGCGTGAGTGCGTGAGTGAGTGAGTTTCCGATTCGATCATCCGAGTTGACTCATCCGAGTTGACTGATCCATC GCCATGGCCGAACCTGAAGAATCAAACATGGACCCTTTCCTTCTTGATTACCAACCCTCAGAACTCGGAATCGCCTCCGAATTCTTGTCCACGTGGCTTC CTTTCCTAACCCAAGATCTCTGTCACCACTGCACTCAATCACTCTCTCATCGCATTCGTCGCATTCATCCAGAGTCACAAAATGATGATGATTCCAATGG TCCAAACTCTAATAATGTGCAATTACAACAGAAAAGTGACAATATTTATGATGATTACTGTGATGCGCATTCTCGTGGGAATCGGAAGGATGGGGCGGAG GCAAATTCTTGTATTGAGACTCCGAGTCAACGCATGTCATGGGCTGATATGGCTCAAGAAGACAATGAATTTGTCGAAGAAGAGCACGAGTCAAAGAATA ACAATCTGGTTGTGGCTGATTCAAACCCTTCAGATACATATTTCGTTGTTACCGAGAAACCTACACTGCCTAGAGAGCAGAGAGAGTACATTAGGTTCAT GAATGTGAAGCGGGAGAAAGAGTACATGTGTTTTGAGAGGGTTAATGGAAAACTGGTGAACATCCTCGAAGGTCTTGAACTACACATTGGCGTTTTTAGT GCTGCTGAGCAGAGAAGGATAGTGAGTTATGTTGCTGAACTGCAGGAGATGGGAAGAAAGGGAGAATTGAACGATCGGACATACTCAACTCCTCAAAAGT GGATGAGGGGCAAGGGACGTCAGTCTATCCAATTTGGATGTTGTTACAATTATGCAATGGATTTAGATGGTAACCCACCTGGTATTCTTCTCAGAGCAGA TCCTATACCTGATCTTTTCAAGGTCATCATACGGCGCCTGGTTAGGTGGCATGTGCTCCCTCCTACTTGTGTTCCAGATAGTTGCATTGTTAATGTCTAT GAAGTAGGCGACTGGGTACCTCCACACATAGATAACCATGATTTTGTTCGACCATTTTGCACCGTCTCATTTCTTTGTGAGTGCAATATAGTCTTTGGTT CTAATCTAAAGATTTTGGGGCCTGGTGAATTTGATGGTCCAATTGCTATTCCCCTGCCTGTAGGATCTGTACTCGTCTTGAATGGAAATGGTGCTAATGT AGCCAAGCACTGTGTACCTGCAGTTCCTATGAAGAGGATATCAATAACGTTTAGAAGAATGGATGAATCCAAGCGGCCTATCGACTATGTTCCAGAACCT GATCTTCAGGGGATCCAACCATTGGTCTATGAGGTTGAAAAGAAAAAGAGGTCAACTGGACCCAGACCTAATCGTCCGATGAAGAGTCCGAAAGATAGGA GAGGCGACAGGATTGATGCAGTAGGACCTGCAACTAGAAGTGACAGATTCCTCGAGCCTCACGAGTCGAGTCAAAGCTCACAAAGACCTTCAAATAGGTG GACTAGGGTAAGGCCTGGTAGTTGACAGACGCCGTGGTTTTTAGGATCCAAGGTTCATGTTTGCTTACAATTTATTCTCTCGTCTTAATAGCCATGTGTT GGTTGTGTTCATGCAATTCTTGTACATATCAATAGGTTTGTCATAAAGATTATTTCTTTGGTTTCTGAGGAAGCTTTCCAAAGCACAGCCAGTTTATGAA ATCCATGTATGCTCAAGTTATTGAGTTGGGTGGTGCTTTATTATCTTCATTTCTCAGGCCACAGGTGAATAAAGGCTGCAACTTGGTGACAAGTCGTCCA GATTCGTGTGTATTTCGTTACAAGCTAAAATGTGGCTGCCTTATATATGGCCTCTTAATTTGTTTAGCTTGATGCTTTATATTGCATTGATGAATAGAAA TGCTTATAGTTTATGCTTTACACTTTTTAATTTGGTCCTTACACTTATTTTCTTTAAAATGAGTTACTATAGAAATCTGTTCAATAATAAACAATCTGTT CCAGTAAAA
• Tissue: pods
• Gene name: LI_gene_140837;
• Additional information: details;

Expression of Ll_transcript_356765

FPKM

• PAB: 16.1
• PNAB: 7.9
• PS1: 11.9
• PS2: 12.9
• PS3: 14.8
• PW1: 15
• PW2: 19.6
• PW3: 25.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_356765

• Blastp: RNA demethylase ALKBH5 from Mus with 30.11% of identity
• Blastx: RNA demethylase ALKBH5 from Mus with 30.11% of identity
• Eggnog: alkB, alkylation repair homolog 5 (E. coli)(ENOG410Y0IS)
• Kegg: Link to kegg annotations (268420)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457898.1)
• Pfam: 2OG-Fe(II) oxygenase superfamily (PF13532.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;