Ll_transcript_357097

• Id Trinity: TRINITY_DN45813_c0_g1_i1
• Name Transcript: Ll_transcript_357097
• Sequence: CGAGTGAGAAAAAACCCCTAATCCCATTACCGGCACTACTGAGTGTGTGGAAGATGGTTTCAGAGTATGGCCTCAAACTCGCGGTTCACCTCATCACCAC TCACTTCGGCAACATCGTCGCTAATGTATGCGAGAATCTTCTTAGAAAAGGACCTCTCACTTTGGACCAGTTGATTCGCTTCACCGAACTCAAAAGAGAG CAAGTCAAAAACTCTCTCCTCGTCTTAGTTCAACACAATTGTGTTCAGCCTTTTCAAAACCAACAACAACAAGATGCTGCTAAAACAGAGTACATGGCGT TGTTTGACAATATACTGCATCGACCTAGGTTTCCTAAATTTTTGGACATTGTGTCGCGCAAACTTGATGATGAATGTGTAGAGCTTCTTGATGGATTGCT TCGCAATGGTAGGCTTACGCTTCAACAGATGGCTGACAGGGCCAGTGAAGGAAAAGAAAATCCTGTGGCTATAGATGTTGTGCGAGAGAGCCTTTGTAAA CTTTTGGCCGGTCAATATGTTGAACGCTGCCCTGCCCCTGAGCCAGTTCTTTTTCCAGTAGTTGAAGAAACTACTACCAGGAAGCGGGGTGCTAAGTCTG CTAAGATATTCCAACCACCTCTAACTATAGAACAACGCGTTCTAGAAGTATCAGTGGCTGGGGAATCAATCAGATTTTCACTCACAGCAGATACAGGATT TAATGCCGACAGAGAAACAAATTCTGATGATTGCCCCATGACAAGTGTTGAAGATGCTGTAAAAGAAGAGCTAACTCCTTGGCGTGCAAACTTCGAAGAG TTTATGCGTCATCTTAGGCATAAGGCATTGATTGAGAATGTAAGAACTAGGCTGGATGAAGGAGCTGCTACTATCCTAAGTGCAATACTAGATGCTACTA GAACTGCAGAGAGAAAAGTGAAAGTACAAAATTCAGTGCCCTTATCACTGGAAGCAATTTTCACCGAGGTGGTGAAGAGTGAAAATGGCCGTACTATGAC CATAGATCGTGTTAAAGCTTCTCTTGTCCAGTTGGGCTGTCCATCGAGGGTGCCTGATGATTCATATACTATTGATTTGAAGAATATTATTGAATTGGCC CGAAATGATGAGGTTGAGTCTATTGTGCTGAAAAGGTATGGACCTTATGCATATAGAATGTTCAGGCTACTGTCTAAGGCCAATTGTTTTCTCGAGACAG ATAAGATAGCAGAGTCTACTCTTGTTGAGAAAAAGGAAGCTCCAAGGTTACTACATGGATTATGGAAGGATAACTACTTGCATATGGAGAAATTACAAGT GATGGCAAGTAAGCAATCAAGGTTTGTGATGTGGAAAGTTAATAAACCTCAGCTATGGGATTATGTACTAGACGAGATGTACCATGCTGCCTTAAATTTG AACCTAAGACTGGGTTTGGAGCAAGAGAAGGATGTAGAGCTTTTAAGTGTTCCTCTAGACAAGATCAACGAGTCCAAATCGTTACAGAAGAAATTCGAGC GGAGACGAAGAGTCCGGTTACTCCTGGGATCATCATTGATGAAACTTGATGATGCTCTCATGCTTTTCCATGACTTCTGAACATAACCACATATTTATTA TGACATCTTCTTCTTCTTCAAGGAATATAACAATGTAGCATTTTAATATGGAAACTACCTTATTACGAATGCAATACAACTATTCACATTAAGTAATGAC AGGATGCAAATTTTGACTTGATAATTAGATTTGGATTTAATATGGATTCTCTATTGGGTTTACTACTCACATATTAAAATGATTGTATGCCATAAAACTA TCTGGAAACTTGGAAAGTTGAATAAATATAAATGTAACTTATTTGTTAACCTATTTTTTGTTATAAAC
• Tissue: pods
• Gene name: LI_gene_140844;
• Additional information: details;

Expression of Ll_transcript_357097

FPKM

• PAB: 2.6
• PNAB: 11.9
• PS1: 15.1
• PS2: 14.3
• PS3: 18.6
• PW1: 8
• PW2: 7.2
• PW3: 11.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_357097

• Blastp: DNA-directed RNA polymerase III subunit RPC3 from Danio with 24.47% of identity
• Blastx: DNA-directed RNA polymerase III subunit RPC3 from Danio with 24.74% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs(ENOG410XPVH)
• Kegg: Link to kegg annotations (393201)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442130.1)
• Pfam: RNA polymerase III subunit RPC82 helix-turn-helix domain (PF08221.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;