Ll_transcript_355860

• Id Trinity: TRINITY_DN45822_c0_g1_i1
• Name Transcript: Ll_transcript_355860
• Sequence: GTTGTGCAAGGAGGGTAGAATTGATGAGGCGATTTCGTTATTGGATGAGATGCAGATTGAAGGTATTTTCCCGAACCATGTCGCGTTCAATGTGTTGATC AATGCGTTGTGCAAGAAGGGTGACTTGGGACGTGCTTCCAAGCTTGTTGATAATATGTTTCTGAAAGGTTGTGTCCCAAATGAGGTGACATATAATGCCC TTGTTCATGGGTTGTGTCTTAAAGGGAAGCTGGACAAGGCGGTGAGTCTATTGAACCGAATGGTGTTGAATAAATGTGTGCCGAATGATGTTACTTATGG AACACTCATTGATGGATTTGTTAAGAAAGGTAGAGCTGCTGATGGGGCTTCTGTGTTAATCTCTATGGAAGAGAGAGGTCATCGTGGGAATGAGTACATT TACTCTTCTCTTATTAGTGGCCTGTTCAAGGAGGGGAAGCCTGAGCATGCAATGCAACTGTGGAAGGAAATGGTGGAGAAAGGATGTAAACCAAACACTA TAGTGTATAGTACTCTTATAGATGGTCTTTGCCGGGAAGGGAAGCCAGAAGAAGCAAGGGAAATGGTATTTGAGATGAAGAATAAAGGTTACCTGCCCAA TGCTTTCACTTATAGCTCCCTAATGAAGGGTTTTTTCAATACAGGTGATAGCCATAAAGCAATTCTTGTTTGGAAAGAAATGGCTGATAATAACTGTAGT CATAATGAGGTTTGTTACAGTATACTCATTAATGGATTGTGCAAGGATGGCAAGCTTACGGAGGCCTTAATGGTGTGGAAGCAAATGCTGAGTAGAGGAA TTAAACTAGATGTTGTAGCTTACAGTTCAATGATTCATGGCTTTTGTAATGCTAATTTAGTCGATCAAGGCCTGAATCTTTTCCATCAAATGCTTTATCA GGAGCCCCAATCACAACCAGACGTGATTACATATAACATACTTTTAAATGCTTTGTGCATGCAGAATAGAATCTCCCGTGCTATTGATCTTCTAAACATG ATGCTAGATCAAGGTTGTGACCCTGATTTTATTACCTGCGATATTTTCTTGAAAACTTTAAGAGAAAAAGTTAACCCACCTCAAGATGGGAGGGAGTTCC TAGATGAGCTTGTAATCCGGTTAGTTAAGCGACAGAAAACAATAGGTGCTTCCAAAATTATAGAAGTGATGCTACACAAGTTTTTACTGCCAAAAGCTTC TACCTGGGCAGTAGTTCTTCAACAGCTGTGTAAACCTAAGAAAATTCGATTAGCCATTAATGAGTGTTGGAGCAGGCTATATCACTGATATGTTGTAAGA TGTTATTCAATTAATATTTATTTAGGAACTCTGGATAGTGATTTTTTGATCCAGGTCTTCAAGCATAAGGCCTCAAATTTTCGACAAGCAGATACAATGA TACACCTAAGATACACAGATTTTTTCATCTCTCTCAATCTCTCTAATTCTGATGCCTTATTTTATTCTGCATCTTTTTTCCATAAGAACATAAATTTTAT TGTGTCTACAATCTACATGTAGATGTTGGTATGAGTCTGAGCCAAACAGAACAGGTGACAATGACAATAGTACTGCTTAGCAATGCAGCAGTTTAATCCT CTTACAATCTTTTTGAACTTACTAAAGTCAATTTTTGTCTGTCTAGAAAATTTACTTGTTGCAACCTACATGGTGATTAATAATATTCCTGAAAGGGCGA GAAAGTGCTACAATTATTCTGAAATGGTGAAGTGCTCAACTGTCCAATCAACTTGATTTGTTCAAATGTGCCATCTTTAGACGATTGTATTCGTAGTACA AGACCCAGTCAAACTGGTGTACATGCAGTTTTTGAAAGAGCTATCAGTAACTTTGGCCAGTAAACAATTTTTACTATTTGCAAGTATTTTTGCAGAATGC ATGTTAAGACAAGTGAGGGTGAGCTTCGGCGCAACGGTATGGCTCCTGCTTCATGACCATGAGGTTACAAGTTTAAATCCTGGAAGCAGCCTCTCCGCTT GTAGGGATAAAGTTGCATACATCTATCCTTCCCATACCCCACTAGGCGGGAGTCTCGTGTACTGGACCGCCCATTTGCATGTGGCAAGTGAAATTCAATG TGATGAACCAGTGAGCTGGGCTGCTACTATATGCCAACATACAGAAATGCAATTTTCTTTTGTGGCCTGTTACAGAGTACATTCATTGCTTTGAGCTTAA GTTCTAAGAAAAAGAATGCAAGGCTTTTTTCTGATACAAATTATATATCAGAAGCAGCATATCTGCAGTTCCATTTGAGTTGTTTTCCTTGCTCTTTTCC AATTAAATTGGTTTGGGACCCGGGGCTTGTAAAAGTATTAGTTTTCCCTAGTTTACTCCTAATTGTCACAGCTGTAGATGCAGATTCAGTGGAAAAACTA TGGAGCTATGATTGATGAAACCAATAGCTCAAGTGTCAGCAATTTTTGTTTAAAGCCAATTCATGTAAAAATTAAGTTTCTTAAAGTTTGTCAATTACAC TGTTATCTGTTGAAACACAACCTTTTAGTTTGATGCTGCATTCTTGATTTCTTAAAACTTTATTCATTAGCAG
• Tissue: pods
• Gene name: LI_gene_140874;
• Additional information: details;

Expression of Ll_transcript_355860

FPKM

• PAB: 0
• PNAB: 1.2
• PS1: 1
• PS2: 0.6
• PS3: 1.4
• PW1: 1.1
• PW2: 0.8
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_355860

• Blastp: Pentatricopeptide repeat-containing protein At4g20090 from Arabidopsis with 65.81% of identity
• Blastx: Pentatricopeptide repeat-containing protein At4g20090 from Arabidopsis with 65.81% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT4G20090)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439321.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;