| Id Trinity | TRINITY_DN45832_c5_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_356635 |
| Sequence | AAAGCAAAACAACAACTTCCCATTCTTTTTCCATTATATCCACTCAAAAGTTATATCAATGACTTGTTATTATTAAAAAAAGGGTAAACCTTGCTGTTAA CCAACCATCACATTCTCATGGTTTCAACCTCCTTTCACTTTTAGGAGAATCTTAGACTCAATTGCCCTCATCCACTACTCAATAATGAAACTTTTCTACA TGTTACATACTTATACACACATACTCATAATATATATACCTAAGTTTCTTCAATTATTCATTTCACACCCACTGAGAGGAAATAAGAGTAGAATGAGGAT GACCAACCACAACTTACTAATGTATTTCACTACTTTATCACTCTACATCATTTTAAGTTCATGGATCTCTATTGAAGCTGCCCCTATACCCTCTCTTATC ACATACCTCCCTAACTTTAAGGGCACTTTTCCATCCAAGCACTATTCCGGGTATGAAATACATTATCTTCTAAAAAATCATGATTATGAATTTCATTTTA TTTTATGAAATTATAGCATAATTTCACTAAATGACAATGACCCTTTTTTCTGCAATCACTTTAGCATTATAATTCATGTATAAGATTATGATCCCAACCA CAAGTTTTTCAAAAATCATGGGTTTCTATGAAAATCATGATTATGAATTTCATCTTATTTTATGAGAGAGGACACTTCCACAAAATGATAATGTACTTTT GTACAAGAAATAAAATGAGAATAATTATTGAGTTCAGATATATAAGCATTGACGGAAATGGTGAGAATGGGAAGAACTTGTTCTACTATTTTGTAAGTTC AGAAAGAAACCCAGAAAAGGATCCAGTTGTTCTATGGTTGAATGGGGGACCAGGGTGCTCAAGCTTTGATGGCTTCATTTATGAGCATGGACCATTCAAC TTCGAGGCAGCCAAAACAAAAGGGAATCTGCCCACCTTACATATCAATCCATATAGTTGGTCTAAGGTTTCCAATATTATTTATTTGGATTCACCGGCTG GGGTTGGCCTCTCCTACTCCGAGAATACCACTAATTACATTACGAGTGACCTTCAAACTGCTTCTGATACCCATGCTTTCCTCTTCAAGTGGTTTGAGCA ATTCCCTGAATTCCTTGATAATCCGTTTTACATTTCTGGAGAATCTTATGCTGGAATATATGTGCCCACTTTAGCTTCTGAAGTAGTTAAAGGAATTAGG GGTGGTATTAAACCCGTGATCAACTTTAAGGGTTACATGATTGGAAATGGTGTCACTGATGGGAAATTTGATGGCATTAATGCTTTAATTCCATTTGTGC ATGGAATGGGCCTCATATCAGACAATATCTACGAGGATTTACAAGCTTATTGCAAAGGACAGTACCGTAATGATGCTAATGTAAAGTGTACGGAGATTAT CGAAAAGGTTTACAAGGCTATTGATGGGCTTAACGTGTACGATATACTAGAGCCATGCTACCATAACCCAGAAGCTGAAGCTTCCAAAGGAAATAGAAGC AGTTTGCCACTAAGTTTCCAACAATTAGGGACTACAGACAAGCCTCTACCTGTGAGAAAGAGGATGTTTGGTCGAGCTTGGCCCTTTCTAGCACCTGTTC AACAAGGCCTCCTTCCTTTATGGCCCCAATTATTGGCTCAAATTAGGCATGTTGATTGTGTTGTAAGTTAACCCCATCAAGCATCTACATGTACATATGT TCAAGAATTTGTTACTATACAACAACAATCAAGTCGTAATCTTAAAAGTACAGGATCGATCAAACAACATAATGTTTTATCGTAAAATAACTAAAGTAGT TTGGTTTGGCAGAATGATGAAGTAGCAAGTTCATGGCTAAACAATGCACAAGTGAGGAAAGCCATTCATGCTGAGCAGGAAACAGTGGCTGGTCCTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_140921; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_356635
| Blastp | Serine carboxypeptidase 1 from Hordeum with 62.91% of identity |
|---|---|
| Blastx | Serine carboxypeptidase 1 from Oryza sativa with 53.85% of identity |
| Eggnog | carboxy-peptidase(COG2939) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439878.1) |
| Pfam | Serine carboxypeptidase (PF00450.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |