Id Trinity | TRINITY_DN45832_c5_g1_i7 |
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Name Transcript | Ll_transcript_356638 |
Sequence | AAAGCAAAACAACAACTTCCCATTCTTTTTCCATTATATCCACTCAAAAGTTATATCAATGACTTGTTATTATTAAAAAAAGGGTAAACCTTGCTGTTAA CCAACCATCACATTCTCATGGTTTCAACCTCCTTTCACTTTTAGGAGAATCTTAGACTCAATTGCCCTCATCCACTACTCAATAATGAAACTTTTCTACA TGTTACATACTTATACACACATACTCATAATATATATACCTAAGTTTCTTCAATTATTCATTTCACACCCACTGAGAGGAAATAAGAGTAGAATGAGGAT GACCAACCACAACTTACTAATGTATTTCACTACTTTATCACTCTACATCATTTTAAGTTCATGGATCTCTATTGAAGCTGCCCCTATACCCTCTCTTATC ACATACCTCCCTAACTTTAAGGGCACTTTTCCATCCAAGCACTATTCCGGATATATAAGCATTGACGGAAATGGTGAGAATGGGAAGAACTTGTTCTACT ATTTTGTAAGTTCAGAAAGAAACCCAGAAAAGGATCCAGTTGTTCTATGGTTGAATGGGGGACCAGGGTGCTCAAGCTTTGATGGCTTCATTTATGAGCA TGGACCATTCAACTTCGAGGCAGCCAAAACAAAAGGGAATCTGCCCACCTTACATATCAATCCATATAGTTGGTCTAAGGTTTCCAATATTATTTATTTG GATTCACCGGCTGGGGTTGGCCTCTCCTACTCCGAGAATACCACTAATTACATTACGAGTGACCTTCAAACTGCTTCTGATACCCATGCTTTCCTCTTCA AGTGGTTTGAGCAATTCCCTGAATTCCTTGATAATCCGTTTTACATTTCTGGAGAATCTTATGCTGGAATATATGTGCCCACTTTAGCTTCTGAAGTAGT TAAAGGAATTAGGGGTGGTATTAAACCCGTGATCAACTTTAAGGGTTACATGATTGGAAATGGTGTCACTGATGGGAAATTTGATGGCATTAATGCTTTA ATTCCATTTGTGCATGGAATGGGCCTCATATCAGACAATATCTACGAGGATTTACAAGCTTATTGCAAAGGACAGTACCGTAATGATGCTAATGTAAAGT GTACGGAGATTATCGAAAAGGTTTACAAGGCTATTGATGGGCTTAACGTGTACGATATACTAGAGCCATGCTACCATAACCCAGAAGCTGAAGCTTCCAA AGGAAATAGAAGCAGTTTGCCACTAAGTTTCCAACAATTAGGGACTACAGACAAGCCTCTACCTGTGAGAAAGAGGATGTTTGGTCGAGCTTGGCCCTTT CTAGCACCTGTTCAACAAGGCCTCCTTCCTTTATGGCCCCAATTATTGGCTCAAATTAGGCATGTTGATTGTGTTAATGATGAAGTAGCAAGTTCATGGC TAAACAATGCACAAGTGAGGAAAGCCATTCATGCTGAGCAGGAAACAGTGGCTGGTCCTTGGGAAATATGCACAGATAGGATAGAGTATTATGGCAATGC TGGAAACAGCATGATTCCTTACCACAAGAACCTAACCAAACTGGGCTATCGAGCACTTATTTTCAGGTGCAAATGTGCAATTATGCATGCATGCTTGAAT TTGAGCACTGATATTAGTGGTTGAGATTTTGTGCATAATTGTAGAGATTAATATTAGCATCATTATGTGTTATGCATGCTAGTGGGGATCATGATATGTG TGTTCCATTTACCGGAAGTGAGGCTTGGACTCGTTCTATGGGATATAAGATTGTGGATGAATGGAGACCATGGATCTCTAATGACCAAGTTGCTGGGTAA CTTACTGCTCTCTACTTTTATTCTTACTATTATATATTGTGATAGTGTAAAAATTTATATACACTTAATGTATCATTCATCATTCATTTGTATTACTTTT ATTGGAGAATTATTGATAATTGAAATGGATGATAGATGATACATTAACAATGTAAGTGTGAAAAACTTTTACATTGTCAATACATACATCTTTTTCTCTT TCATATCATGATCTTATTTCTTGCCATAGCTTTATTTATCTAATAATTTGCATCACTTTCCTCACTTGAGTTTAGCTTTATTGACGTATGTGTTATCATT TGTTGCAGATACTTGCAAGCATATGACCACAACCTCATTTTCCTCACCATCAAGGTGAATCATAAAAGATAATAATCTATGTTACTAATATTGAATAATA TAGAAGTACACAATAAGAAAGTGACATACGATACTTGTAAACCAAAGGATATATCATTTTGCGATATAGATATATCAGAAACTAATTAATTTAATGTTGC AGGGAGCTGGACACACAGTACCGGAATATAAGCCCAGGGAGGCACTGGATTTTTACACCAGATGGTTGGAAGGAAAACCAATATGATTAATTAGTACATG AATTATGTAGTGTACACATTTCACAATAATGAATAAACATGTATAGCTGTATGGTAGTACCCTGGGCATACAATACAAGTCTTGTGATTGAATTTGACAC ATAAGATTCAGGTTCATTATTATACCAACTGTATTTATTATTCCTCATGTTGTAGACTAGTTTAAATGTTTAATCATCAACAAAATTAGCCAAACAAGCA ATTCAAATAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_140921; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_356638
Blastp | Serine carboxypeptidase-like 20 from Arabidopsis with 59.47% of identity |
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Blastx | Serine carboxypeptidase 1 from Hordeum with 61.7% of identity |
Eggnog | carboxy-peptidase(COG2939) |
Kegg | Link to kegg annotations (AT4G12910) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439878.1) |
Pfam | Serine carboxypeptidase (PF00450.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |