Ll_transcript_356479

• Id Trinity: TRINITY_DN45845_c0_g1_i2
• Name Transcript: Ll_transcript_356479
• Sequence: GTTCAATTTCATCAAAACAGTTCACATTCTAAGGAACATTTTCAACACCAATCTTTACACAATCAAGTGAAAACATGGGTCTATCCATTCTTTCATCTCT AAAATTCTCAGCATTCCTTTTGTTATTGATTAACTTCTTCATATTTGAGCTCGTGCTAGCGGAAACTACCCGACACTACCGTTTCGATATAAGGTTCCAA AATGTGACGCGACTATGCCACACGAAAACCATGATAACAGTTAATGGTCAGTTTCCAGGACCGCGCATCGTAGCTAGGGAGGGCGACCGTCTACTTATCG AAGTTGTTAACCATGTGCCAAACAACATCTCCATTCATTGGCATGGCATTAGACAACTTCAATCAGGTTGGGCTGATGGACCAGCATATGTGACTCAATG CCCCATCCAAACAGGCCAAAGTTATGTTTACAATTACACTATTAAGGGTCAGAGAGGCACACTTTTTTGGCATGCTCACATATCTTGGTTAAGATCAACT ATCTATGGTCCTCTCATCATTCTTCCTAGGCACAATTCTCAGTATCCTTTTGCAAAACCTCATAAGGAAGTTCCAATCATATTTGGAGAATGGTGGAATT CTGATACTGAGGCAGTGATAACCCAAGCCATGCAAAATGGTGGAGGACCAAATGTTTCTGATGCATACACAATTAATGGACTTCCCGGGCCATTGTATAA CTGCTCGGCCAAAGATACGTTCAAGTTGAAGGTGAAGCCTGGGAAGACTTACCTTCTACGTTTGATCAATGCTGCACTCAACGATGAGTTATTCTTCGGC ATTGCGAATCACACTCTCAAAGTTGTTGAAGCAGATGCAGTTTATGTTAAACCTTTTGTGACTAACATAATCCTTATTGCACCTGGCCAAACCACTAATG TTCTTCTCAAGACCAAATTGCACTACCCTAATGCCACATTCTTAATGAGTGCTAGACCTTATGTGACTGGCCTAGGCACTTTTGATAACTCCACTGTGGC AGGTATTTTGGAATATAAGACCCCATCTAAGACTCATAATACATTGAAAAACCTTCAACTACTTAAACCTATTCTGCCAGCACTCAATGATACTTCTTTC GCAACGAAATTCGCGAAGAAAATGCGAAGCTTAGCGAGTGCTAAGTTTCCGGCTAATGTTCCTCAAAAAGTTGATAGACACTTTTTCTTCACAATAGGCC TTGGTACAAGTCCATGCCAGAATAACCAAACTTGTCAAGGACCTACTAATGCAACAAAATTTGCAGCAGCAGTGAACAATGTATCATTCATACTCCCAAC AACTGCACTTCTTCAATCACATTTCTTTGGTCAATCCAATGGAATTTACTCTCCTAACTTCCCTAATAGCCCCTTGATTCCATTCAACTATACCGGCACG CCGCCGAACAACACCATGGTGAGCAATGGAACAAAGGTTGTGGTTCTTCCATTCAACACAAGTGTGGAACTTGTCATGCAAGGCACTAGTATTCTTGGTG CAGAAAGCCACCCTCTCCATTTGCATGGCTTTAACTTCTTTGTTGTTGGTCAAGGTTTTGGTAACTATAATCCAAATAAGGACCCTGCTAACTTCAATCT TGTTGATCCTGTTGAAAGGAACACAATTGGTGTCCCTTCTGGTGGATGGGTCGCGATTCGATTCCTAGCAGATAATCCAGGGGTATGGTTCATGCATTGT CATTTGGAAGTACACACTAGTTGGGGTTTGAGAATGGCATGGGTTGTCTTAGATGGAAAGCTACCAAATCAGAAGTTGTTTCCACCACCATCTGATCTTC CAAAGTGTTAACTAAAAGCTGAAATTTCTTCAATTTGTTTCAACACTATGATCCTTACTTTTTGTAATTCAATATTGGGCAATTGTTTTCAATTGATTTT ATTGCCTTCATTTTTTATTAGGACTTATGGCTTGAGTTGAAGGTGAGAAATGTATTTATATAAGATGCATTAATAATAGCAATATATGTGTGATATTGTA ATTCTTTCATTTGTTACTTACAACAATTATGTTCTTTATTCTTATCTTATCCATATTTTTACAAGTTATCCCA
• Tissue: pods
• Gene name: LI_gene_140993;
• Additional information: details;

Expression of Ll_transcript_356479

FPKM

• PAB: 0.4
• PNAB: 14.3
• PS1: 0.2
• PS2: 0.3
• PS3: 0.6
• PW1: 12.5
• PW2: 2.6
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_356479

• Blastp: Laccase-17 from Arabidopsis with 77.57% of identity
• Blastx: Laccase-17 from Arabidopsis with 79.42% of identity
• Eggnog: Multicopper oxidase(COG2132)
• Kegg: Link to kegg annotations (AT5G60020)
• CantataDB: Link to cantataDB annotations (CNT0001549)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431275.1)
• Pfam: Multicopper oxidase (PF07732.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;