Ll_transcript_357075

• Id Trinity: TRINITY_DN45849_c0_g1_i11
• Name Transcript: Ll_transcript_357075
• Sequence: AAAGAGTAATATATCTCGTACTCACAATAAGATTAACGTATGTTAGATAAAAATTTAGTAGGAAAATATATCATTTTTTCCACAGATAAAAAAAGAGAGT AAAATGAAGCCATGATAAGTGTATTGGCCTAATTTGATTGCATCAAGAGGGAGAGTGAGTGTGAGTGTTGTTGTTGTCGTCAACACAACACAACACTGAG AATGGAAAACGCCGACGTTTTCTTAGGCTTACACGATTTCCTCGATCGCATGCGTCAACCCTCCGCTTCCGATTTCGTTAAATCTATCAAAAGTTTTATA GTTTCATTTTCAAATAATGTTCCTGATCCAGAGAGGGATAGTACATCAGTACAAGAGTTTTTTTCCAATATGGAGGCAGCTTTTAGGGCTCATCCTCTTT GGGCTGGTTGCTCTGAAGACGAGCTCGAAAGTGCCGGTGAAGGTCTTGAGAAGTATGTCATGACAAAGTTATTTTCTCGCGTGTTTGCTTCAGTTCCAGA TGATGTAAAACTCGATGAACAACTTTCTGAGAAGATGGCCTTGTTTCAACAGTTTATTCGACCAGAAAATTTGGATATCACGCCAGCTTTTCAGAATGAA ACATCATGGTTGGTGGGTATATAACTAAACATTCAAAACTATTTTTATTTGGGTCTATATATACAGTTAGGTCAGCTAAAGCCATGCCCTCATGTTTTAT CACTTAAAAAGGGACAACAAAATAATTATGTTCAATGAGTTCTTGGATTGTCAACCAACAATGATACAATATCAACATTAGGGTAATTCTATATACACCC ATAAAACCATTATTCACACCCAAACGGATAGCCTATCTGCCAGGCTATTTACACAGACAGGTAGCCATCTGAAATTCTGAATGGGTGTGAGCAATGGTTT GTTGGGTGTGTATAGAATTGCCCTCAATATTGAAAGCAACCTAACTTTTCTCATGTCTCTTGTAGCCTGGTTTTTACGGCAACTGTGAAGTTTTTGGTGT TCACCATAAACTCATATCTGAACTTGTTGAGAATTGTATGATTAAATTCCAAGTTGGAACCCCACATTCATGGAACATGAGCACCTTAGACTAAGTAGTC TAAGCTCATATCCTAGGGGTCCCTATTCTTTCAGTTTAATTTTAGTACATCAGAAGTATAATTTACGATCTATCCACATTTCACTTACTTTTGGTCTTCA TTTCTCAATGCCTTTAGATTGAGTGACTCTTGGCTGTCACAGTTGGATTTCAATGATTTTAGATATGGTTATTGGGTTTGTTCTAAAGGTTGGTGGATAA TATTCTCCATGGCCAAGATTTTCCTAAGAATCAACTTTCTGTTTGATGTATTCTTGAGCTCTCACTAGTCACTATATTAGTTTGTAAGTAATGAGTTTGT CAATTGCAGGCAGAAACCTTGGAAGAATTCTTCCTAATTTCTGCTTCCTTTAAATCTCATACTTTCTGTCTTATTCTTATGGTGGCAGCTTGCACAGAAA GAACTACAGAAAATCAACATGTACAAGGCACCCAGAGACAAACTTGTTTGTATCTTGAATTGTTGCAAGGTTATTGGTAATTTGCTACTTAATGCTTCTG TCACATCCAATGAAAATCCTCCAGGAGCTGATGAATTTCTTCCTGTGCTAATTTATGTTACCTTAAAGGCAAACCCTCCACAACTGCACTCAAATCTGCT GTACATACAAAGGTTTAGACACCAATCTCGGTTGGTCGGGGAAGCAGCATATTATTTTACAAACATGCTCTCTGCCGAGTCCTTCATCTCAAACATTGAT GCAAAAGCCATTTCAATGGATGAAACTGAGTTTGAGAGAAACATGGAGTTCGCTCGTGCCCTTCTTTCGGGGCTTTCTATTGATACACAAGATCCAAGTT CACCTTATCCAAATCATGGACACCATCCAAGGTCAGAACCTACTAAGCACAGAAATAAAGCTTTGAATGATAATAAGGACCCTGCATCACAAACTGCGTC ATCGGCTGCAAAATCTGAAATTAAGAAAGTGACTTCCGAGGATGAGTTTTTGATCACAAAAGTTCCATCCCTCTCGGATTTGGAGAATAAAGGAGCAAAC ATGCTTTTAAAGGAGGACAAGGTGAATGATGTTTTCAGGGAATATCCATATTTGTTTTCTAGTGTAGGAGATCTTACAGTATCTGATGTTGAAGACCTGC TAAATAATTACAAACAACTTGTTTTCAAGTATGAATGTCTTTCCAAAGGGTTAGGTGTCTCTCCTACATCTCAACCTCCACCTAATCTCCAAAACAAAAC CGAAGACCATGTTGAAATCACCGTGGAATCTTCAGATGATGGACCTGTAGGTGTCAATGATAAATCAGAAGGATATACTAATACAGCAGAAGATAGTTCC GATAAAGTTTCACTTCTTGAGGATGAAAAAAATTAAATCTGATCTGCCACAGGATGAGGTGGTTGCACCAGATGGTGGTGCCAACATAGAATCCTCCAAC TAATTGTAAATAGCCACAGTAGTGTATGTTTCTTCATCATATACCCCTCATTTTTTTCACTCCTTCATATTTAGTTTATATTTTGGTCGAGGTTGCTGCC TTAGCCCCTAACTTTCCTTTTGTGAAATGATGGCAATACCATATTAGAACATATTGAATAGATTTTAGAACTCCAGTGAAAATTTTGTCAAGAAAATTAG AAATTTTGCTTTCCTCTTTGTGGCGGATAAAAAAGAACGTGAAGATGCAAATCTAGCTTAGTGTGAAGATGCAAATCTAGTTTAGTTTGATTATCCCTGC ATGTGGTGTATATTTATTGGTTGATGGAGATATTAGCTTGTTTATATCAGTGGCAGTAATGTTCATTTGATGACTCTAAGCTATGAAGTTTTACCATTTT CTCCATTATGGAACACTTGCC
• Tissue: pods
• Gene name: LI_gene_141000;
• Additional information: details;

Expression of Ll_transcript_357075

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0.1
• PS2: 0.5
• PS3: 0
• PW1: 0
• PW2: 0.4
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_357075

• Blastp: Vacuolar protein sorting-associated protein 9A from Arabidopsis with 59.14% of identity
• Blastx: Vacuolar protein sorting-associated protein 9A from Arabidopsis with 58.58% of identity
• Eggnog: guanine nucleotide exchange factor(ENOG410YGAZ)
• Kegg: Link to kegg annotations (AT3G19770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415562.1)
• Pfam: Vacuolar sorting protein 9 (VPS9) domain (PF02204.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;