| Id Trinity | TRINITY_DN45849_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_357065 |
| Sequence | CTTACCCTATAAGTAACTTGATCCGATTCAATTTTAGGGAGTTATGGTCGTTGAAAGAAAGTCATATACACACAAGGGGTTAGTTACTTATTACTAAAAT TGTGAGATTGTAAGTGTAATTGAATTGTAATTGGATGCATAATCAAGAGGGAGAGTAAGCTCAGTCTTTGTGTTGTCAACACTCAACAAAATACTGAGGC AGAGGAGAATGGAAAACGACGACGTTTTCTCTGGCTTACACGACTTCCTCGACCGCATGCGCCAACCCTCCGCTTCTGATTTCGTTAAAGCTATCAAAAG TTTTGTAGTATCATTTTCAAATAATGCTGCCGATCCAGAGAGAGACAGTGCCTCAATTCAAGACTTCTTTTCCGATATGCAGGCAGCTTTCAGGGCTCAT CCACTTTGGGCTGGCTCCTCTGAAGATGAACTCGAAAGTGCCCGTGAAGGGCTTGAGAAGTATGTCACGACGAAGTTATTTTCCCGTGTATTTGCTTTAG TTCCAGATGATGTAGAACTCGATGATAAACTTTCTGAGAAGATGCCCTTGATTCAACAGTTTATTCGACCAGGAAATTTGGATATCAAGCAAGCTTTTCA GAATGAAACATCATGGTTGCTTGCACATAAAGAACTACAGAAGATCAACATGTACAAGGCACCCAGAGACAAACTCATCTGTATCTTGAATTGTTGCAAG GTTATTGGTAATTTGCTGCTGAATGCTTCTGTAACTTCCAATGAGAATCCTCCAGGAGCTGATGAATTTCTTCCTATGCTAATTTATGTTACCATTAAGG CAAACCCTCCACAACTGCACTCAAATCTGATGTACATACAAAGGTTTAGGCATCAATCTCGATTGGTTGGGGAAGCAGCATATTATTTTACGAACATGCT CTCTGCTGAATTCTTCATCTCAAACATCGATGCAAATGCCATTTCAATGGATGAAACTGAGTTTGAGAGAAACATGGAGTTCGCTCGTGCCCTTCTTTCG GGGCTTTCTATTGATACACAAGATCCAAGTTCACCTTATCCAAATCATGGACACCATCCAAGGTCAGAACCTACTAAGCACAGAAATAAAGCTTTGAATG ATAATAAGGACCCTGCATCACAAACTGCGTCATCGGCTGCAAAATCTGAAATTAAGAAAGTGACTTCCGAGGATGAGTTTTTGATCACAAAAGTTCCATC CCTCTCGGATTTGGAGAATAAAGGAGCAAACATGCTTTTAAAGGAGGACAAGGTGAATGATGTTTTCAGGGAATATCCATATTTGTTTTCTAGTGTAGGA GATCTTACAGTATCTGATGTTGAAGACCTGCTAAATAATTACAAACAACTTGTTTTCAAGTATGAATGTCTTTCCAAAGGGTTAGGTGTCTCTCCTACAT CTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_141000; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_357065
| Blastp | Vacuolar protein sorting-associated protein 9A from Arabidopsis with 64.91% of identity |
|---|---|
| Blastx | Vacuolar protein sorting-associated protein 9A from Arabidopsis with 64.91% of identity |
| Eggnog | guanine nucleotide exchange factor(ENOG410YGAZ) |
| Kegg | Link to kegg annotations (AT3G19770) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415562.1) |
| Pfam | Vacuolar sorting protein 9 (VPS9) domain (PF02204.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |