Ll_transcript_357068

• Id Trinity: TRINITY_DN45849_c0_g1_i5
• Name Transcript: Ll_transcript_357068
• Sequence: AAAGAGTAATATATCTCGTACTCACAATAAGATTAACGTATGTTAGATAAAAATTTAGTAGGAAAATATATCATTTTTTCCACAGATAAAAAAAGAGAGT AAAATGAAGCCATGATAAGTGTATTGGCCTAATTTGATTGCATCAAGAGGGAGAGTGAGTGTGAGTGTTGTTGTTGTCGTCAACACAACACAACACTGAG AATGGAAAACGCCGACGTTTTCTTAGGCTTACACGATTTCCTCGATCGCATGCGTCAACCCTCCGCTTCCGATTTCGTTAAATCTATCAAAAGTTTTATA GTTTCATTTTCAAATAATGTTCCTGATCCAGAGAGGGATAGTACATCAGTACAAGAGTTTTTTTCCAATATGGAGGCAGCTTTTAGGGCTCATCCTCTTT GGGCTGGTTGCTCTGAAGACGAGCTCGAAAGTGCCGGTGAAGGTCTTGAGAAGTATGTCATGACAAAGTTATTTTCTCGCGTGTTTGCTTCAGTTCCAGA TGATGTAAAACTCGATGAACAACTTTCTGAGAAGATGGCCTTGTTTCAACAGTTTATTCGACCAGAAAATTTGGATATCACGCCAGCTTTTCAGAATGAA ACATCATGGTTGCTTGCACAGAAAGAACTACAGAAAATCAACATGTACAAGGCACCCAGAGACAAACTTGTTTGTATCTTGAATTGTTGCAAGGTTATTG GTAATTTGCTACTTAATGCTTCTGTCACATCCAATGAAAATCCTCCAGGAGCTGATGAATTTCTTCCTGTGCTAATTTATGTTACCTTAAAGGTAATCTC ATCATTCAAACACAAATAGATGCATGCATTTTTTTGGCATAAGTAATTTGGTTTTACAGCACATTGTTATTACTTGTACTTCATAAAAAAATTATGGGTA TAACTTACCTTTAGTTCTATCTCACATTGCTTTGTTTTTTTCACTGCGTGAATTTTGTTTATTTTAATAAAGCATGTAATTCTGTGAAGTTATGTTGTAA AGTCACTTGTGACTTATTTTACAAGACAATATTTAATATGGGTGTTGAAATATCATGTTGCATGTGCTGGTCAATTCATCTCAGTGTTATCATATTTTGC ATAGGTATGCATATCCTCCTTTCTGAGTGTTGGCTGCATCATTTTTTGCTTTGAAGAACTTAGTGCTTTGAACTGCAGCTGCTCATAGTGCAGAGCTATA TGACCTTATCTTTCAAAATGTTTTTTTATATGAAAAGTTTTCACTTGTATTTTTTGCTCAAAACTATGGAGTGAATAATGACTAAAATAGACAATTGATA CAGACTGCTGTCAGATTTCAAATAATATTGTATATTGTGTTCCTATATTGGCAAAACAGGTACATTTTTTTTACTAACGATACTATGCAGGCAAACCCTC CACAACTGCACTCAAATCTGCTGTACATACAAAGGTTTAGACACCAATCTCGGTTGGTCGGGGAAGCAGCATATTATTTTACAAACATGCTCTCTGCCGA GTCCTTCATCTCAAACATTGATGCAAAAGCCATTTCAATGGATGAAACTGAGTTTGAGAGAAACATGGAGTTCGCTCGTGCCCTTCTTTCGGGGCTTTCT ATTGATACACAAGATCCAAGTTCACCTTATCCAAATCATGGACACCATCCAAGGTCAGAACCTACTAAGCACAGAAATAAAGCTTTGAATGATAATAAGG ACCCTGCATCACAAACTGCGTCATCGGCTGCAAAATCTGAAATTAAGAAAGTGACTTCCGAGGATGAGTTTTTGATCACAAAAGTTCCATCCCTCTCGGA TTTGGAGAATAAAGGAGCAAACATGCTTTTAAAGGAGGACAAGGTGAATGATGTTTTCAGGGAATATCCATATTTGTTTTCTAGTGTAGGAGATCTTACA GTATCTGATGTTGAAGACCTGCTAAATAATTACAAACAACTTGTTTTCAAGTATGAATGTCTTTCCAAAGGGTTAGGTGTCTCTCCTACATCTCATCCTC CATCTACTCCGAAAAACAAAGCCCAAGACCATGCTGAAACCACAGTAGAATCTTCAGATGATGGACCTATAGGTGCCAATGATAAATTAGATGAATCTAC TGACACAACAGAAGATAGTTCAGATAAAGTTTCACTTCTTGGGGAGAAAAAAATTGAATCTGGTCTGCCACATGATGATGCAGTTGCGCCTGAGGGTGAT ACCGAAACAGAAACCTCTAGTTAATTGTAACTAGCTAAATCATTTATTTTTCTTCATTATGCAGTCCTCATTTTTTGCTCTTTCTTGTTTAATTTACATT TTCGGTTGCGTGGTTGCTGCTCTAGCCCCTAACTTTCTTATGTGAAAGGATGGAAATGCCATGACTGTACTGTTATGCCCTGTGTAACATGTTATTGAAT AGATTTTAGAACTGCAGTGAAATTTTTTTCAAGAACAATTAGAAAATTTGCAATGCTTTTTGTAGCGAATAAAAAAGAATGTGAAGATGCAAATGTACTT TAGTTTGATTAACACTATGCGGTGAATATTGGTTGATGGAGATATTAGC
• Tissue: pods
• Gene name: LI_gene_141000;
• Additional information: details;

Expression of Ll_transcript_357068

FPKM

• PAB: 2.9
• PNAB: 5.6
• PS1: 4.6
• PS2: 4.9
• PS3: 7.5
• PW1: 7.3
• PW2: 6.7
• PW3: 4.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_357068

• Blastp: Vacuolar protein sorting-associated protein 9A from Arabidopsis with 50% of identity
• Blastx: Vacuolar protein sorting-associated protein 9A from Arabidopsis with 81.82% of identity
• Eggnog: guanine nucleotide exchange factor(ENOG410YGAZ)
• Kegg: Link to kegg annotations (AT3G19770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415562.1)
• Pfam: Vacuolar sorting protein 9 (VPS9) domain (PF02204.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;