Ll_transcript_356569

• Id Trinity: TRINITY_DN45857_c1_g2_i3
• Name Transcript: Ll_transcript_356569
• Sequence: GAAATGGTTAGTAAAGGTATTCAACCTAATCTTGTTACTTACACTTGCTTAATTCATGGCCTTTGTAATTCTGGTAGATGGAAAGAGGCTTCAACCCTAC TTAGTGAGATGATGCAAAAGGGAATCTTTCCTAATGTGCAAACGTTTACGATCTTAGTGGATGCTTTTTGCAAAGAGGGGTTGATTATGGGGGCTAAAAG CATTATCAGTTACATGATTCAAATGGGGGAAGAGCCTAATGTTGTCACATATAACTCATTGATTACTGGTTATTGCTTGCAGAATAAAATGAACGAGGCT ACGAAAGTGTTTGATTTGATGATTGATAAGGGTTGCTTACCAAGCATTGTAACATATAATTCATTAATCCATGGGTGGTGTAAAATTAAAAATGTTGATA AAGCTATCTATCTCTTGGGTGAAGTGGTTAATAAAGGATTGGATCCAGATATTGCCACTCTGAACACTCTTATTGGTGGGTTTTGCAAAGCTTGGAAACC GTTAGCGGCAAAAGAATTGTTTTTTACAATGCACAAATATGGCCAATTTCCCGATCTCCAAACCTGTGCCATTATATTGGATGGTCTATTCAAATGTAAT TCTCATTCTGAGGCAATATCATTGTTTAGGGAAATCGAGAAGATGAATTTGGATCTTCATATTTTAATCTATAATATTATGCTTGACGGGATGTGCAGTT CTGGAAAAACGAAGGACGCGCGGAAATTGTTTTCATCTTTGCCTGCTAAAGGGTTGAAATTCGATGTTTATACATATACCATAATGATTCAAGGTCTATG TAAAGAAGGACTACTGGATGATGCTGAAGACTTATTGATTAACATGGAAGAGGATGGATGCATGCCTGACATGTGCACTTATAATGTCTTAGTCCAAGGA TTGCTGCGAAAATACGATTTTTCTAGGTCGAAAAAATACCTTCAAATAATGAAAGACAAAGGCTTTTCAATAGATGCAACCACAACAGAATTGCTTATCT ACAGCTTCTCTGCTAATGAAAGAAATGACCATCTTCACGAGTTTCTGCAAAAGAATGCCTAAGCATTCAAGAAGGAATGTGAAGTCACAGAATTGTAAAA TGAACACAAGCAGCAGCACAAGCTGTAGCAGAAGAATCTCCATATGGATAAGAGTTATTGGAACAACATTCAGAACAAGAACGGTTGGCAAGCCCAGATG TTGTTGTGGCTCGATGTGGCCGCATCGTTATGATTCAGTGTCACCCAACAGTTACAGTGTGATGCTACAACCGCAATATTATGGCCCATTAAGTGATGTG GTCTGTAATTTAAATCACTGTAACCAACTATAAGGCATTTCTTAAGATGAGGTGAGTTGGAGTGTGCAGTGTAGAAATGAGGCTCTTAGGCAGTTGAAGC ATCATTTGTAGAGCTCAGTCCCACATGGTGCAATATTTCAAGTTTCTCAGGTTAAAAAAATGCAGCAGGGGATCATTATGTGGAATCCACGGCCAACCCG AAGCTGGATTCAGTAGTTATTTTCCAGCTTCTCGCCATGGTGATTGGCGGATCAATTCCTCATTAATTGGAAAGGTTGGCCATATCAGGGGCAATGGAAG ATGTTGGTAAAATTCATTTGTTTCAGACCTTCAATATCGAGGACAAGGTTCTTATCTTCTATTTGTTGCTTGACTAACCTTGTTTACCGTGTTAACCATT TCAGATTCAGTAAGAGGTTCTTATCCTCTCAATGTGTCTTGCTGACATGCCCGGTTTTCTGGATGAAGAGGTCTTGAAACCAGGACTTCTGCACTGATTG TAATTGAAAGTGTTCTCATCATACAAAGAATCTTGAAAGCATGAGAAGGAAGAATATGCTCACGCTCACAAACGCGCGCACGCACACACAGAGGGATAAC ATAACATACAGTCCGATTTCCCGATGTTCCACTTTGCAAATCAAGCAAAAAACCCTTTGCCAACCTTGGAGCAGTTTCATTCCTCCTAAATAATGATGTG CCATATAGGACTGGTTACAAATAGATATCTTACTGAATCTTAATGTATCTGCATATATAGTAACCTTCCAAGTCGTATATGATCCATCAAAATGAAGATC ATCCATATTGAGATCTGTATAAACTCACGGTTTCAATTATTGTAAGTAAATTTCTTGGATGATGTTTATACTTTAAAAAGTTGACATTTAAGGAATTAAG TGAAATTTAAGCAGAGGAAACCCATACCAGTGCTCATTCTTACGAGCATAGGCTTGCT
• Tissue: pods
• Gene name: LI_gene_141021;
• Additional information: details;

Expression of Ll_transcript_356569

FPKM

• PAB: 0.5
• PNAB: 0.1
• PS1: 3.4
• PS2: 0.4
• PS3: 0.9
• PW1: 1.6
• PW2: 1.4
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_356569

• Blastp: Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial from Arabidopsis with 42% of identity
• Blastx: Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial from Arabidopsis with 43.54% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G12700)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418111.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;