Ll_transcript_356572

Id TrinityTRINITY_DN45857_c1_g2_i5
Name TranscriptLl_transcript_356572
SequenceGAAATGGTTAGTAAAGGTATTCAACCTAATCTTGTTACTTACACTTGCTTAATTCATGGCCTTTGTAATTCTGGTAGATGGAAAGAGGCTTCAACCCTAC TTAGTGAGATGATGCAAAAGGGAATCTTTCCTAATGTGCAAACGTTTACGATCTTAGTGGATGCTTTTTGCAAAGAGGGGTTGATTATGGGGGCTAAAAG CATTATCAGTTACATGATTCAAATGGGGGAAGAGCCTAATGTTGTCACATATAACTCATTGATTACTGGTTATTGCTTGCAGAATAAAATGAACGAGGCT ACGAAAGTGTTTGATTTGATGATTGATAAGGGTTGCTTACCAAGCATTGTAACATATAATTCATTAATCCATGGGTGGTGTAAAATTAAAAATGTTGATA AAGCTATCTATCTCTTGGGTGAAGTGGTTAATAAAGGATTGGATCCAGATATTGCCACTCTGAACACTCTTATTGGTGGGTTTTGCAAAGCTTGGAAACC GTTAGCGGCAAAAGAATTGTTTTTTACAATGCACAAATATGGCCAATTTCCCGATCTCCAAACCTGTGCCATTATATTGGATGGTCTATTCAAATGTAAT TCTCATTCTGAGGCAATATCATTGTTTAGGGAAATCGAGAAGATGAATTTGGATCTTCATATTTTAATCTATAATATTATGCTTGACGGGATGTGCAGTT CTGGAAAAACGAAGGACGCGCGGAAATTGTTTTCATCTTTGCCTGCTAAAGGGTTGAAATTCGATGTTTATACATATACCATAATGATTCAAGGTCTATG TAAAGAAGGACTACTGGATGATGCTGAAGACTTATTGATTAACATGGAAGAGGATGGATGCATGCCTGACATGTGCACTTATAATGTCTTAGTCCAAGGA TTGCTGCGAAAATACGATTTTTCTAGGTCGAAAAAATACCTTCAAATAATGAAAGACAAAGGCTTTTCAATAGATGCAACCACAACAGAATTGCTTATCT ACAGCTTCTCTGCTAATGAAAGAAATGACCATCTTCACGAGTTTCTGCAAAAGAATGCCTAAGCATTCAAGAAGGAATGTGAAGTCACAGAATTGTAAAA TGAACACAAGCAGCAGCACAAGCTGTAGCAGAAGAATCTCCATATGGATAAGAGTTATTGGAACAACATTCAGAACAAGAACGGTTGGCAAGGTAATTTT CTCTGCCAGTAAACTATGTAAAATACCATTGGGCGAAGAAAAACCATAGGGGAAATGATAAAGAAAGACCTAGAGCTCAATGCTTTGTCAATGAACATGA TATATGATAGAGCATTATGGTGTTGTTCGTTCCATGTAGCCGATAAAGGCTTGGTTGTTGTTGTTGTTAAACTATGGAAAATAATTAAATCAATAGAGAG AAAATCAAAGAGACATGTTATAAATAAATAGAAAGAAGTGCAATTTCTCCTCATAATGTAACCAAACTTTGTGAATATGTGTCATATGATAGCTGCAAGT CCATGGGAGGGAAAGTGCAGTTGTCAGATTGCTGCATACTAAACTGTTTTTGAAGGAAAAAATGTTCTGTCCAAATTATAACAAATAAAATACTGTGTCA TGATGAGTATGATCAATTATAATGTTTGGTTTTTGAAATTCACGAGGGAGAGGAGAAAGAAAAGTGTAATTTCTCATTCTAATGCAAACCAACCATTGCC AATATGTGCCATATGATATCTGCAAACCCATAGAATAGAAAGTGCAGTTGGCTGATTGTGAAGTATCAAACTGTTTTTGAAGGGGAGAAAGTAAAATTGT CTATCCATGTTTCAATAACTAAAATCTTGTGTCGTAACCAACTAGTGTTTTAAATTGCGGTTGCAGTCACGATTACGGTCATTGCGATACAGATTGTGGT GTGAATTATTTTATGAATAATTTTTTTAATTTGATGCAGCCCAGATGTTGTTGTGGCTCGATGTGGCCGCATCGTTATGATTCAGTGTCACCCAACAGTT ACAGTGTGATGCTACAACCGCAATATTATGGCCCATTAAGTGATGTGGTCTGTAATTTAAATCACTGTAACCAACTATAAGGTGATATTTGTGAATTTAC AAATAGTTATCAGTATTATTTTTCAGTCCTTCAATCCCAAAATTTACTAATGTTAAATCTTCCAACTTGAATGGTGTAAATATTCATCTATAGGCATTTC TTAAGATGAGGTGAGTTGGAGTGTGCAGTGTAGAAATGAGGCTCTTAGGCAGTTGAAGCATCATTTGTAGAGCTCAGTCCCACATGGTGCAATATTTCAA GTTTCTCAGGTTAAAAAAATGCAGCAGGGGATCATTATGTGGAATCCACGGCCAACCCGAAGCTGGATTCAGTAGTTATTTTCCAGCTTCTCGCCATGGT GATTGGCGGATCAATTCCTCATTAATTGGAAAGGTTGGCCATATCAGGGGCAATGGAAGATGTTGATTCAGTAAGAGGTTCTTATCCTCTCAATGTGTCT TGCTGACATGCCCGGTTTTCTGGATGAAGAGGTCTTGAAACCAGGACTTCTGCACTGATTGTAATTGAAAGTGTTCTCATCATACAAAGAATCTTGAAAG CATGAGAAGGAAGAATATGCTCACGCTCACAAACGCGCGCACGCACACACAGAGGGATAACATAACATACAGTCCGATTTCCCGATGTTCCACTTTGCAA ATCAAGCAAAAAACCCTTTGCCAACCTTGGAGCAGTTTCATTCCTCCTAAATAATGATGTGCCATATAGGACTGGTTACAAATAGATATCTTACTGAATC TTAATGTATCTGCATATATAGTAACCTTCCAAGTCGTATATGATCCATCAAAATGAAGATCATCCATATTGAGATCTGTATAAACTCACGGTTTCAATTA TTGTAAGTAAATTTCTTGGATGATGTTTATACTTTAAAAAGTTGACATTTAAGGAATTAAGTGAAATTTAAGCAGAGGAAACCCATACCAGTGCTCATTC TTACGAGCATAGGCTTGCT BLAST
Tissuepods
Gene nameLI_gene_141021; 
Additional informationdetails; 

Expression of Ll_transcript_356572

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_356572
BlastpPutative pentatricopeptide repeat-containing protein At1g12700, mitochondrial from Arabidopsis with 42% of identity
BlastxPutative pentatricopeptide repeat-containing protein At1g12700, mitochondrial from Arabidopsis with 43.54% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT1G12700)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019418111.1)
PfamPentatricopeptide repeat domain (PF13812.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;