Id Trinity | TRINITY_DN45874_c2_g1_i27 |
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Name Transcript | Ll_transcript_355736 |
Sequence | GGAATACAAGAATATTAGTTTCACTGTTTGGGATGTCGGGGGTCAGGACAAGATTCGTCCCTTGTGGAGGCATTACTTCCAGAACACACAGGGTCTTATA TTCGTTGTTGACAGCAATGACAGGGATAGAGTTGTTGAGGCCAGAGATGAGTTGCACAGGATGTTGAATGAGGATGAACTGAGAGATGCTGTATTGCTTG TGTTTGCCAACAAACAAGATCTTCCTAACGCAATGAATGCTGCTGAGATTACTGATAAGCTTGGTCTACACTCTCTACGACAGCGCCACTGGTATATCCA GAGCACATGTGCTACTTCAGGTGAAGGGTTATACGAGGGACTAGACTGGCTTTCAAATAACATTTCTAGCAAGGTTACCTATGTTTATTTTAGTATGAAG CCGAGGTTTAAACTTGAGTATAATATCTATGCACTGTCAGTCTAAAGATTTATACAAAAGTATTATATTATTCATCATTCATTTGGATTACTTTTTTTCG AAGAGTCAATGATGATTGAATATGAATTGTGAATGATGTAGTGACAATGTATAAAACTCATAATTTTTTTCCTCTTTAAACTTTACAGTCTTTCTTATTA CTGTTTTTTATCATTTGTTTTCTCTCTTCTTTCAGGGTTAGAGATATCATGAAGGTGCTGATTACTTTTCCAAATTGTTGATGACAACTGATTTTCAGAT TATAGGCATCAATTCTGTTGTAATTCTTTTTGCTTCTGTTCTTTTATGATATAACAATTATCATTTGTCCTTTGTAATCAGGTTTTGGTTCAAATAAATA TTATCCATGTATTCTGCTGGACTACAAGTCTGCTTAAAGTGTTG BLAST |
Tissue | pods |
Gene name | LI_gene_141112; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_355736
Blastp | ADP-ribosylation factor 1 from Arabidopsis with 98.4% of identity |
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Blastx | ADP-ribosylation factor 1 from Arabidopsis with 99.19% of identity |
Eggnog | GTP-binding Protein(COG1100) |
Kegg | Link to kegg annotations (AT2G47170) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419533.1) |
Pfam | ADP-ribosylation factor family (PF00025.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |